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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, extracellular

Predictor Summary:
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, plastid
Any Predictor:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
 extracellular: 16377746
extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 16377746 doi
J Zhu, S Chen, S Alvarez, VS Asirvatham, DP Schachtman, Y Wu, RE Sharp
Division of Plant Sciences, University of Missouri, Columbia, Missouri 65211, USA.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0649100-01 Rice mitochondrion 94.71 94.71
Zm00001d039089_P001 Maize mitochondrion 91.18 91.18
HORVU3Hr1G058460.1 Barley mitochondrion 90.59 90.32
TraesCS3D01G236200.1 Wheat mitochondrion 89.41 89.41
TraesCS3B01G265000.1 Wheat golgi, mitochondrion, unclear 89.12 89.12
TraesCS3A01G234800.2 Wheat mitochondrion 87.94 87.94
Zm00001d009640_P002 Maize mitochondrion, plasma membrane 91.18 84.24
KRH55117 Soybean mitochondrion 85.0 83.77
GSMUA_AchrUn_... Banana mitochondrion, unclear 85.29 83.33
GSMUA_Achr4P08580_001 Banana mitochondrion 85.0 83.29
KRH26205 Soybean mitochondrion 84.41 83.19
Solyc12g014180.1.1 Tomato mitochondrion, unclear 83.24 82.75
Bra038112.1-P Field mustard mitochondrion 75.59 82.37
Solyc07g062650.2.1 Tomato extracellular 83.82 82.37
PGSC0003DMT400039788 Potato mitochondrion 82.35 82.11
VIT_10s0003g01000.t01 Wine grape mitochondrion 85.0 82.1
PGSC0003DMT400032266 Potato cytosol, extracellular 83.24 81.79
AT3G15020.1 Thale cress mitochondrion 81.76 81.52
CDY59402 Canola mitochondrion 81.76 81.52
Bra030951.1-P Field mustard mitochondrion 81.76 81.52
CDY25868 Canola mitochondrion 81.76 81.52
CDY02518 Canola mitochondrion 81.47 81.23
CDY55845 Canola mitochondrion 81.47 81.23
CDY24107 Canola mitochondrion 81.18 81.18
CDY26002 Canola mitochondrion 81.76 81.05
AT1G53240.1 Thale cress mitochondrion 81.18 80.94
Bra039662.1-P Field mustard mitochondrion 80.59 80.59
VIT_19s0014g01640.t01 Wine grape mitochondrion 82.06 80.4
CDY55842 Canola mitochondrion 30.29 76.3
KXG33002 Sorghum cytosol, nucleus, peroxisome 98.53 69.5
Zm00001d041243_P001 Maize mitochondrion 65.0 61.39
Zm00001d034241_P001 Maize extracellular, plastid 64.12 60.89
Zm00001d050409_P001 Maize extracellular, mitochondrion, plasma membrane, plastid 61.76 52.9
Zm00001d032187_P001 Maize plastid 60.29 52.03
Zm00001d022229_P001 Maize plastid 55.0 48.7
Protein Annotations
KEGG:00020+1.1.1.37KEGG:00270+1.1.1.37KEGG:00620+1.1.1.37KEGG:00630+1.1.1.37KEGG:00680+1.1.1.37KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37EntrezGene:100272900MapMan:2.3.8Gene3D:3.40.50.720Gene3D:3.90.110.10UniProt:B4FRJ1
EMBL:BT039729GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005618GO:GO:0005623
GO:GO:0005886GO:GO:0005975GO:GO:0006091GO:GO:0006099GO:GO:0006108GO:GO:0008150
GO:GO:0008152GO:GO:0009505GO:GO:0009987GO:GO:0016020GO:GO:0016491GO:GO:0016615
GO:GO:0016616GO:GO:0019752GO:GO:0030060GO:GO:0030312GO:GO:0055114InterPro:IPR015955
InterPro:L-lactate/malate_DHInterPro:Lactate/malate_DH_CInterPro:Lactate/malate_DH_NInterPro:Lactate_DH/Glyco_Ohase_4_CInterPro:Malate_DH_ASInterPro:Malate_DH_type1
InterPro:NAD(P)-bd_dom_sfProteinID:ONM39824.1PFAM:PF00056PFAM:PF02866PIRSF:PIRSF000102ScanProsite:PS00068
PANTHER:PTHR11540PANTHER:PTHR11540:SF45SUPFAM:SSF51735SUPFAM:SSF56327TIGRFAMs:TIGR01772UniParc:UPI00017B8360
EnsemblPlantsGene:Zm00001d044042EnsemblPlants:Zm00001d044042_P001EnsemblPlants:Zm00001d044042_T001SEG:seg::
Description
malate dehydrogenase3 malate dehydrogenase3
Coordinates
chr3:+:217573164..217581039
Molecular Weight (calculated)
35642.1 Da
IEP (calculated)
8.028
GRAVY (calculated)
0.045
Length
340 amino acids
Sequence
(BLAST)
001: MRPSLMRSTS QLLRRRSYSS ASGQPERKVA ILGAAGGIGQ PLSLLMKLNP LVSSLSLYDI AGTPGVAADV SHINSPALVK GFMGDEQLGE ALEGSDVVII
101: PAGVPRKPGM TRDDLFNINA GIVKNLSTAI AKYCPNALVN MISNPVNSTV PIAAEVFKKA GTYDEKKLFG VTTLDVVRAK TFYAGKANLP VTDVNVPVVG
201: GHAGITILPL FSQATPATNA LSDEDIKALT KRTQDGGTEV VEAKAGKGSA TLSMAYAGAV FADACLKGLN GVPDIVECSF VQSTVTELPF FASKVRLGKN
301: GVEEVLGLGE LSDFEKEGLE KLKSELKSSI EKGIKFANDN
Best Arabidopsis Sequence Match ( AT1G53240.1 )
(BLAST)
001: MFRSMLVRSS ASAKQAVIRR SFSSGSVPER KVAILGAAGG IGQPLALLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS EVVGYMGDDN LAKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC TAIAKYCPHA LINMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RARTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSSDILTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVIEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKPELKS SIEKGVKFAN Q
Arabidopsis Description
mMDH1Malate dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP06]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.