Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 9
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
mitochondrion:
12746528
mitochondrion: 15069638 mitochondrion: 15276442 mitochondrion: 16429260 mitochondrion: 19010998 extracellular: 19038476 mitochondrion: 23027867 extracellular: 23159799 extracellular: 24083427 nucleus: 24133045 extracellular: 25047395 plasma membrane: 27800704 plastid: 27992503 extracellular: 28232208 |
msms PMID:
15276442
doi
Risø National Laboratory, Plant Research Department, P.O. Box 49, DK-4000 Roskilde, Denmark.
msms PMID:
23027867
doi
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
25047395
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID:
12746528
doi
Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, The University of Western Australia, Crawley 6009, Australia.
msms PMID:
16429260
doi
ARC Centre of Excellence in Plant Energy Biology, CMS Building M310, University of Western Australia, 35 Stirling Hwy, Perth, WA 6009, Australia.
msms PMID:
15069638
doi
Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.
msms PMID:
23159799
doi
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID:
19010998
doi
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID:
24083427
doi
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID:
19038476
doi
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d044042_P001 | Maize | extracellular, mitochondrion, plastid | 94.71 | 94.71 |
Os05t0574400-01 | Rice | extracellular | 92.06 | 92.06 |
HORVU3Hr1G058460.1 | Barley | mitochondrion | 90.0 | 89.74 |
TraesCS3D01G236200.1 | Wheat | mitochondrion | 89.41 | 89.41 |
TraesCS3B01G265000.1 | Wheat | golgi, mitochondrion, unclear | 89.12 | 89.12 |
TraesCS3A01G234800.2 | Wheat | mitochondrion | 87.94 | 87.94 |
VIT_10s0003g01000.t01 | Wine grape | mitochondrion | 87.06 | 84.09 |
KRH55117 | Soybean | mitochondrion | 85.0 | 83.77 |
KRH26205 | Soybean | mitochondrion | 84.41 | 83.19 |
GSMUA_AchrUn_... | Banana | mitochondrion, unclear | 85.0 | 83.05 |
Solyc12g014180.1.1 | Tomato | mitochondrion, unclear | 83.53 | 83.04 |
AT3G15020.1 | Thale cress | mitochondrion | 82.94 | 82.7 |
Bra038112.1-P | Field mustard | mitochondrion | 75.88 | 82.69 |
Bra030951.1-P | Field mustard | mitochondrion | 82.65 | 82.4 |
PGSC0003DMT400039788 | Potato | mitochondrion | 82.65 | 82.4 |
GSMUA_Achr4P08580_001 | Banana | mitochondrion | 83.82 | 82.13 |
CDY59402 | Canola | mitochondrion | 82.35 | 82.11 |
CDY25868 | Canola | mitochondrion | 82.35 | 82.11 |
Solyc07g062650.2.1 | Tomato | extracellular | 83.53 | 82.08 |
PGSC0003DMT400032266 | Potato | cytosol, extracellular | 83.53 | 82.08 |
CDY55845 | Canola | mitochondrion | 82.06 | 81.82 |
CDY02518 | Canola | mitochondrion | 82.06 | 81.82 |
CDY26002 | Canola | mitochondrion | 82.06 | 81.34 |
VIT_19s0014g01640.t01 | Wine grape | mitochondrion | 82.94 | 81.27 |
AT1G53240.1 | Thale cress | mitochondrion | 81.47 | 81.23 |
CDY24107 | Canola | mitochondrion | 81.18 | 81.18 |
Bra039662.1-P | Field mustard | mitochondrion | 80.88 | 80.88 |
CDY55842 | Canola | mitochondrion | 29.71 | 74.81 |
KXG33002 | Sorghum | cytosol, nucleus, peroxisome | 93.53 | 65.98 |
Os03t0773800-01 | Rice | plastid | 64.41 | 61.86 |
Os12t0632700-01 | Rice | extracellular, nucleus, plastid | 64.71 | 61.8 |
Os08t0434300-01 | Rice | plastid | 60.59 | 57.87 |
Os01t0829800-01 | Rice | plastid | 60.59 | 52.02 |
Os07t0630800-03 | Rice | plastid | 61.18 | 51.49 |
Protein Annotations
KEGG:00020+1.1.1.37 | KEGG:00270+1.1.1.37 | KEGG:00620+1.1.1.37 | KEGG:00630+1.1.1.37 | KEGG:00680+1.1.1.37 | KEGG:00710+1.1.1.37 |
KEGG:00720+1.1.1.37 | MapMan:2.3.8 | Gene3D:3.40.50.720 | Gene3D:3.90.110.10 | EntrezGene:4326249 | EMBL:AK104770 |
ProteinID:BAB55686.1 | ProteinID:BAC00625.1 | ProteinID:BAF05631.1 | ProteinID:BAS73428.1 | ProteinID:EAZ12901.1 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006099 | GO:GO:0006108 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016615 | GO:GO:0016616 | GO:GO:0019752 |
GO:GO:0030060 | GO:GO:0055114 | InterPro:IPR015955 | InterPro:L-lactate/malate_DH | InterPro:Lactate/malate_DH_C | InterPro:Lactate/malate_DH_N |
InterPro:Lactate_DH/Glyco_Ohase_4_C | InterPro:Malate_DH_AS | InterPro:Malate_DH_type1 | InterPro:NAD(P)-bd_dom_sf | EnsemblPlantsGene:Os01g0649100 | EnsemblPlants:Os01t0649100-01 |
PFAM:PF00056 | PFAM:PF02866 | PIRSF:PIRSF000102 | ScanProsite:PS00068 | PANTHER:PTHR11540 | PANTHER:PTHR11540:SF45 |
UniProt:Q94JA2 | SUPFAM:SSF51735 | SUPFAM:SSF56327 | TIGRFAMs:TIGR01772 | UniParc:UPI00000ABD74 | RefSeq:XP_015621604.1 |
SEG:seg | : | : | : | : | : |
Description
mitochondrial malate dehydrogenase, mitochondrial MDHMalate dehydrogenase. (Os01t0649100-01);Malate dehydrogenase. (Os01t0649100-02)
Coordinates
chr1:+:26190754..26194403
Molecular Weight (calculated)
35463.0 Da
IEP (calculated)
8.851
GRAVY (calculated)
0.076
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPSLMRSAS QVLRRRRGYS SASGQPERKV AILGAAGGIG QPLSLLMKLN PLVSSLSLYD IAGTPGVAAD VSHINAPAQV KGFMGDDQLG EALEGSDIVI
101: IPAGVPRKPG MTRDDLFNIN AGIVKNLCTA IAKYCPNALV NMISNPVNST VPIAAEVFKK AGTYDEKKLF GVTTLDVVRA KTFYAGKANV PVTDVNVPVV
201: GGHAGITILP LFSQATPATN ALSDEDIKAL TKRTQDGGTE VVEAKAGKGS ATLSMAYAGA VFANACLKGL NGVPDVVECS FVQSTVTELP FFASKVKLGK
301: NGVEEVLGLG QLSDFEKEGL ENLKGELKAS IEKGIKFANA
101: IPAGVPRKPG MTRDDLFNIN AGIVKNLCTA IAKYCPNALV NMISNPVNST VPIAAEVFKK AGTYDEKKLF GVTTLDVVRA KTFYAGKANV PVTDVNVPVV
201: GGHAGITILP LFSQATPATN ALSDEDIKAL TKRTQDGGTE VVEAKAGKGS ATLSMAYAGA VFANACLKGL NGVPDVVECS FVQSTVTELP FFASKVKLGK
301: NGVEEVLGLG QLSDFEKEGL ENLKGELKAS IEKGIKFANA
001: MFRSMIVRSA SPVKQGLLRR GFASESVPDR KVVILGAAGG IGQPLSLLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS QVSGYMGDDD LGKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLS IAIAKYCPQA LVNMISNPVN STVPIAAEIF KKAGTYDEKK LFGVTTLDVV RARTFYAGKS DVNVAEVNVP
201: VVGGHAGITI LPLFSQASPQ ANLSDDLIRA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPNVVEC SFVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKAELKS SIEKGIKFAN Q
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLS IAIAKYCPQA LVNMISNPVN STVPIAAEIF KKAGTYDEKK LFGVTTLDVV RARTFYAGKS DVNVAEVNVP
201: VVGGHAGITI LPLFSQASPQ ANLSDDLIRA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPNVVEC SFVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKAELKS SIEKGIKFAN Q
Arabidopsis Description
mMDH2Malate dehydrogenase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.