Factsheet for HORVU1Hr1G081550.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G351500.1	Wheat	golgi, plastid	96.74	96.98
TraesCS1B01G363100.1	Wheat	plastid	95.99	96.23
TraesCS1A01G348500.1	Wheat	plastid	95.99	96.23
Os08t0434300-01	Rice	plastid	82.46	92.42
Os01t0829800-01	Rice	plastid	85.46	86.11
Solyc09g091070.1.1	Tomato	nucleus	64.16	85.91
OQU80513	Sorghum	plastid	83.71	84.77
Zm00001d050409_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	83.46	83.88
Zm00001d032187_P001	Maize	plastid	82.46	83.5
HORVU7Hr1G091760.2	Barley	mitochondrion	91.48	78.66
GSMUA_Achr6P02650_001	Banana	plastid	77.69	74.52
GSMUA_Achr5P23320_001	Banana	peroxisome	58.15	73.89
VIT_17s0000g06270.t01	Wine grape	plastid	75.19	72.64
PGSC0003DMT400065411	Potato	plastid	74.69	72.33
PGSC0003DMT400030247	Potato	plastid	74.69	72.33
AT3G47520.1	Thale cress	plastid	72.68	71.96
Bra019504.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	28.57	71.7
KRH56907	Soybean	endoplasmic reticulum	74.19	71.67
KRH03482	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	73.43	71.64
PGSC0003DMT400050235	Potato	plastid	73.93	71.6
GSMUA_Achr7P11540_001	Banana	plastid	74.44	71.39
Solyc03g115990.1.1	Tomato	plastid	73.68	71.36
CDY61271	Canola	plastid	71.43	71.25
CDY21789	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	28.32	71.07
Bra018137.1-P	Field mustard	plastid	70.93	70.4
VIT_14s0108g00870.t01	Wine grape	plastid	75.44	70.33
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	60.9	64.97
CDY47402	Canola	plastid	71.93	61.06
HORVU3Hr1G058460.1	Barley	mitochondrion	51.63	60.41
HORVU5Hr1G098890.10	Barley	plastid	49.87	55.12
CDX98040	Canola	cytosol	21.55	51.5
HORVU5Hr1G002010.1	Barley	plastid	50.63	49.39
CDY19424	Canola	cytosol	20.05	47.06
AT3G53910.1	Thale cress	cytosol	12.28	45.37
CDX77861	Canola	plastid	31.33	43.71
HORVU1Hr1G090710.1	Barley	cytosol	39.35	39.35
Bra019790.1-P	Field mustard	plastid	37.34	38.11
HORVU1Hr1G090720.1	Barley	peroxisome	11.03	20.85
HORVU5Hr1G020370.1	Barley	cytosol	0.5	1.98

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:23.1.3.4.3	Gene3D:3.40.50.720	Gene3D:3.90.110.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0030060	GO:GO:0055114	EnsemblPlantsGene:HORVU1Hr1G081550	EnsemblPlants:HORVU1Hr1G081550.1
InterPro:IPR015955	InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	UniProt:M0Z6C2	InterPro:Malate_DH_type1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00056	PFAM:PF02866	PANTHER:PTHR11540	PANTHER:PTHR11540:SF46	SUPFAM:SSF51735
SUPFAM:SSF56327	TIGRFAMs:TIGR01772	UniParc:UPI000294EE41	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:-:527951848..527953579

Molecular Weight (calculated)

41697.3 Da

IEP (calculated)

7.500

GRAVY (calculated)

0.154

Length

399 amino acids

Sequence
(BLAST)

001: MASAVTMTSA SAQAALVSRP RSHGITSFGG LKASSSSSIG FELGSSFLGK TTSLRASGVT RVVPKAKSAA QILPEASYKV AVLGAAGGIG QPLGLLIKMS
101: PLVSELRLYD IANVKGVAAD LSHCNTPSQV MDFTGPAELA NCLKGVDVVV IPAGVPRKPG MTRDDLFNIN AGIVKSLIEA VADNCPEAFI HIISNPVNST
201: VPIAAEILKQ KGVYNPKKLF GVSTLDVVRA NTFVAQKKDL KLIDVDVPVV GGHAGITILP LLSKARPSVT FTDEETEELT KRIQNAGTEV VEAKAGAGSA
301: TLSMAYAAAR FVESSLRALA GDPDVYECTY VQSELTELPF FASRVKIGKN GVESIISSDL EGVTEYEAKA LEALKPELKA SIEKGIEFVH KQQGATASV

Best Arabidopsis Sequence Match ( AT3G47520.1 )
(BLAST)

001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN

Arabidopsis Description

MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.