CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0434300-01	Rice	plastid	85.28	94.38
Zm00001d050409_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	93.65	92.95
Os01t0829800-01	Rice	plastid	87.82	87.37
Solyc09g091070.1.1	Tomato	nucleus	65.74	86.91
TraesCS1D01G351500.1	Wheat	golgi, plastid	85.79	84.92
TraesCS1A01G348500.1	Wheat	plastid	85.79	84.92
TraesCS1B01G363100.1	Wheat	plastid	85.53	84.67
TraesCS7B01G289400.1	Wheat	plastid	84.52	84.52
TraesCS7A01G386600.1	Wheat	plastid	84.52	84.52
HORVU1Hr1G081550.1	Barley	plastid	84.77	83.71
TraesCS7D01G383100.1	Wheat	plastid, vacuole	84.52	80.24
GSMUA_Achr6P02650_001	Banana	plastid	78.17	74.04
Bra019504.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	29.7	73.58
AT3G47520.1	Thale cress	plastid	75.13	73.45
CDY21789	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	29.44	72.96
GSMUA_Achr5P23320_001	Banana	peroxisome	58.12	72.93
PGSC0003DMT400030247	Potato	plastid	76.14	72.82
PGSC0003DMT400065411	Potato	plastid	76.14	72.82
VIT_17s0000g06270.t01	Wine grape	plastid	75.89	72.4
GSMUA_Achr7P11540_001	Banana	plastid	75.89	71.88
HORVU7Hr1G091760.2	Barley	mitochondrion	84.52	71.77
PGSC0003DMT400050235	Potato	plastid	74.87	71.6
Solyc03g115990.1.1	Tomato	plastid	74.87	71.6
CDY61271	Canola	plastid	72.59	71.5
KRH03482	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	73.86	71.15
KRH56907	Soybean	endoplasmic reticulum	74.11	70.7
Bra018137.1-P	Field mustard	plastid	71.83	70.4
VIT_14s0108g00870.t01	Wine grape	plastid	76.4	70.33
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	62.44	65.78
OQU90313	Sorghum	plastid	62.69	63.66
CDY47402	Canola	plastid	72.84	61.06
EES19985	Sorghum	mitochondrion	52.03	60.29
CDX98040	Canola	cytosol	22.34	52.69
CDY19424	Canola	cytosol	20.56	47.65
KXG37460	Sorghum	mitochondrion	51.02	45.48
KXG24112	Sorghum	plastid	51.27	45.29
CDX77861	Canola	plastid	32.49	44.76
KXG33002	Sorghum	cytosol, nucleus, peroxisome	53.05	43.36
AT3G53910.1	Thale cress	cytosol	11.42	41.67
Bra019790.1-P	Field mustard	plastid	37.56	37.85

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:23.1.3.4.3	Gene3D:3.40.50.720	Gene3D:3.90.110.10	UniProt:A0A1Z5R9Q9	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0006108	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016615	GO:GO:0016616	GO:GO:0019752
GO:GO:0030060	GO:GO:0055114	InterPro:IPR015955	InterPro:L-lactate/malate_DH	InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N
InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_AS	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf	EnsemblPlants:OQU80513	ProteinID:OQU80513
ProteinID:OQU80513.1	PFAM:PF00056	PFAM:PF02866	PIRSF:PIRSF000102	ScanProsite:PS00068	PANTHER:PTHR11540
PANTHER:PTHR11540:SF46	EnsemblPlantsGene:SORBI_3007G137600	SUPFAM:SSF51735	SUPFAM:SSF56327	TIGRFAMs:TIGR01772	UniParc:UPI000B4251C1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:56567941..56570679

Molecular Weight (calculated)

41315.8 Da

IEP (calculated)

8.295

GRAVY (calculated)

0.110

Length

394 amino acids

Sequence
(BLAST)

001: MAPTVAFSSV SAQAGLIQKP RNLGATSYAG LKVPSFRSES SFLGRNASLR AAVTPRIVPK AKSGSQISPQ ASYKVAVLGA AGGIGQPLGL LIKMSPLVSE
101: LHLYDIANVK GVAADLSHCN TPAQVLDFTG PSELANCLKG VDVVVIPAGV PRKPGMTRDD LFNINASIVK SLVEAVADNC PEAFIHIISN PVNSTVPIAA
201: EVLKQKGVYN PKKLFGVTTL DVVRANTFVA EKKNLKLIDV DVPVVGGHAG ITILPLLSKT RPSVTFTEEE TEELTKRIQN AGTEVVEAKA GAGSATLSMA
301: YAAARFVESS LRALAGDPDV YECTFIQSEK TDLPFFASRV KLGKNGVESV VSADLEGVTE YEAKALEALK AELKGSIEKG IAFANKQQEA AASV

Best Arabidopsis Sequence Match ( AT3G47520.1 )
(BLAST)

001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN

Arabidopsis Description

MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.