Factsheet for TraesCS7D01G383100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

plastid 2
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, vacuole
Any Predictor:	peroxisome, plastid, secretory
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G289400.1	Wheat	plastid	93.25	98.22
TraesCS7A01G386600.1	Wheat	plastid	92.77	97.72
TraesCS1D01G351500.1	Wheat	golgi, plastid	89.16	92.96
Os08t0434300-01	Rice	plastid	78.55	91.57
Os01t0829800-01	Rice	plastid	81.69	85.61
Solyc09g091070.1.1	Tomato	nucleus	61.45	85.57
OQU80513	Sorghum	plastid	80.24	84.52
Zm00001d032187_P001	Maize	plastid	79.52	83.76
HORVU7Hr1G091760.2	Barley	mitochondrion	93.25	83.41
Zm00001d050409_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	79.76	83.38
GSMUA_Achr6P02650_001	Banana	plastid	74.22	74.04
GSMUA_Achr5P23320_001	Banana	peroxisome	55.66	73.57
VIT_17s0000g06270.t01	Wine grape	plastid	72.05	72.4
PGSC0003DMT400065411	Potato	plastid	71.57	72.09
PGSC0003DMT400030247	Potato	plastid	71.57	72.09
AT3G47520.1	Thale cress	plastid	69.88	71.96
CDY61271	Canola	plastid	69.16	71.75
PGSC0003DMT400050235	Potato	plastid	70.84	71.36
Solyc03g115990.1.1	Tomato	plastid	70.6	71.12
Bra019504.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	27.23	71.07
GSMUA_Achr7P11540_001	Banana	plastid	71.08	70.91
Bra018137.1-P	Field mustard	plastid	68.67	70.9
VIT_14s0108g00870.t01	Wine grape	plastid	73.01	70.79
KRH56907	Soybean	endoplasmic reticulum	70.36	70.7
KRH03482	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	69.64	70.66
CDY21789	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	26.99	70.44
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	59.28	65.78
CDY47402	Canola	plastid	70.12	61.91
TraesCS3D01G236200.1	Wheat	mitochondrion	49.16	60.0
TraesCS1D01G420500.1	Wheat	mitochondrion	47.23	57.48
TraesCS5D01G019700.1	Wheat	nucleus	49.16	56.98
TraesCS5D01G417600.1	Wheat	nucleus	47.47	55.18
CDX98040	Canola	cytosol	20.48	50.9
CDY19424	Canola	cytosol	19.04	46.47
AT3G53910.1	Thale cress	cytosol	11.57	44.44
CDX77861	Canola	plastid	30.36	44.06
Bra019790.1-P	Field mustard	plastid	35.42	37.6

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:23.1.3.4.3	Gene3D:3.40.50.720	Gene3D:3.90.110.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0030060	GO:GO:0055114	InterPro:IPR015955	InterPro:Lactate/malate_DH_C
InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00056	PFAM:PF02866
PANTHER:PTHR11540	PANTHER:PTHR11540:SF46	SUPFAM:SSF51735	SUPFAM:SSF56327	TIGRFAMs:TIGR01772	EnsemblPlantsGene:TraesCS7D01G383100
EnsemblPlants:TraesCS7D01G383100.1	TIGR:cd01337	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:+:496785466..496786713

Molecular Weight (calculated)

43718.9 Da

IEP (calculated)

8.286

GRAVY (calculated)

0.172

Length

415 amino acids

Sequence
(BLAST)

001: MLARDFYVFY KSDITLFLQL DMASSATISS VGAQAALVSK PRNRGISGLK ASSSISFELG SSFLGKTGSL RASVTTRVAP KAKSVARILP EASYKVAVLG
101: AAGGIGQPLG LLIKMSPLVS ELRLYDIANV KGVAADLSHC NTPSQVMDFT GPAELASCLK GVDVVVIPAG VPRKPGMTRD DLFNINAGIV KSLIEAVADN
201: CPEAFIHIIS NPVNSTVPIA AEILKQKGVY NTKKLFGVST LDVVRANTFV AQKKGLKLID VDVPVVGGHA GITILPLLSK TRPSVTFTDE ETEQLTKRIQ
301: NAGTEVVEAK AGAGSATLSM AYAAARFVES SLRALAGDPD VYECTYVQSE LTELPFFASR VKIGKNGVES IISSDLEGIT EYEANALEAL KPELKASIEK
401: GIEFAHKQQG AAASV

Best Arabidopsis Sequence Match ( AT3G47520.1 )
(BLAST)

001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN

Arabidopsis Description

MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.