Factsheet for TraesCS7A01G386600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G289400.1	Wheat	plastid	97.46	97.46
TraesCS1A01G348500.1	Wheat	plastid	94.67	93.72
TraesCS7D01G383100.1	Wheat	plastid, vacuole	97.72	92.77
Os08t0434300-01	Rice	plastid	82.99	91.85
Solyc09g091070.1.1	Tomato	nucleus	64.72	85.57
Os01t0829800-01	Rice	plastid	85.53	85.1
OQU80513	Sorghum	plastid	84.52	84.52
Zm00001d032187_P001	Maize	plastid	83.5	83.5
Zm00001d050409_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	84.01	83.38
HORVU7Hr1G091760.2	Barley	mitochondrion	95.69	81.25
GSMUA_Achr6P02650_001	Banana	plastid	78.17	74.04
GSMUA_Achr5P23320_001	Banana	peroxisome	58.63	73.57
VIT_17s0000g06270.t01	Wine grape	plastid	75.38	71.91
PGSC0003DMT400065411	Potato	plastid	75.13	71.84
PGSC0003DMT400030247	Potato	plastid	75.13	71.84
AT3G47520.1	Thale cress	plastid	73.1	71.46
CDY61271	Canola	plastid	72.33	71.25
Bra019504.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	28.68	71.07
KRH56907	Soybean	endoplasmic reticulum	74.11	70.7
GSMUA_Achr7P11540_001	Banana	plastid	74.62	70.67
KRH03482	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	73.35	70.66
PGSC0003DMT400050235	Potato	plastid	73.86	70.63
CDY21789	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	28.43	70.44
Bra018137.1-P	Field mustard	plastid	71.83	70.4
Solyc03g115990.1.1	Tomato	plastid	73.6	70.39
VIT_14s0108g00870.t01	Wine grape	plastid	76.4	70.33
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	61.93	65.24
CDY47402	Canola	plastid	72.59	60.85
TraesCS3A01G234800.2	Wheat	mitochondrion	51.27	59.41
TraesCS1A01G412900.1	Wheat	plastid	49.49	57.18
TraesCS5A01G014300.1	Wheat	nucleus, plastid	51.52	56.7
CDX98040	Canola	cytosol	21.83	51.5
TraesCS5A01G407700.1	Wheat	cytosol, peroxisome, plastid	47.97	50.13
CDY19424	Canola	cytosol	20.3	47.06
CDX77861	Canola	plastid	31.73	43.71
AT3G53910.1	Thale cress	cytosol	11.93	43.52
Bra019790.1-P	Field mustard	plastid	38.07	38.36

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:23.1.3.4.3	Gene3D:3.40.50.720	Gene3D:3.90.110.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0019752	GO:GO:0030060	GO:GO:0055114	InterPro:IPR015955
InterPro:L-lactate/malate_DH	InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00056	PFAM:PF02866	PIRSF:PIRSF000102	PANTHER:PTHR11540	PANTHER:PTHR11540:SF46	SUPFAM:SSF51735
SUPFAM:SSF56327	TIGRFAMs:TIGR01772	EnsemblPlantsGene:TraesCS7A01G386600	EnsemblPlants:TraesCS7A01G386600.1	:	:

Description

No Description!

Coordinates

chr7A:+:562215696..562216880

Molecular Weight (calculated)

41079.7 Da

IEP (calculated)

8.301

GRAVY (calculated)

0.165

Length

394 amino acids

Sequence
(BLAST)

001: MASSATISSV GAQAALVSKP RNHGIGGLKA SSSINFELGS SFLGKTGSLR ASVTTRVVPK AKSGARILPE ASYKVAVLGA AGGIGQPLGL LIKMSPLVSE
101: LRLYDIANVK GVAADLSHCN TPSQVMDFTG PAELASCLKG VDVVVIPAGV PRKPGMTRDD LFNINAGIVK SLIEAVADNC PDAFIHIISN PVNSTVPIAA
201: EILKQKGVYN PKKLFGVSTL DVVRANTFVA QKKGLKLIDV DVPVVGGHAG ITILPLLSKT RPSVTFTDEE TEQLAKRIQN AGTEVVEAKA GAGSATLSMA
301: YAAARFVESS LRALAGDPDV YECTYVQSEL TELPFFASRV KIGKNGVESI ISLDLEGITE YEANALEALK PELKASIEKG IEFAHKQQGA AASV

Best Arabidopsis Sequence Match ( AT1G53240.1 )
(BLAST)

001: MFRSMLVRSS ASAKQAVIRR SFSSGSVPER KVAILGAAGG IGQPLALLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS EVVGYMGDDN LAKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC TAIAKYCPHA LINMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RARTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSSDILTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVIEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKPELKS SIEKGVKFAN Q

Arabidopsis Description

mMDH1Malate dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP06]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.