Factsheet for GSMUA_Achr7P11540_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g091070.1.1	Tomato	nucleus	62.02	86.58
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	74.52	82.89
Os08t0434300-01	Rice	plastid	69.71	81.46
Os01t0829800-01	Rice	plastid	73.56	77.27
Zm00001d050409_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	73.56	77.08
VIT_17s0000g06270.t01	Wine grape	plastid	76.44	77.0
GSMUA_Achr6P02650_001	Banana	plastid	76.2	76.2
OQU80513	Sorghum	plastid	71.88	75.89
PGSC0003DMT400065411	Potato	plastid	74.76	75.49
PGSC0003DMT400030247	Potato	plastid	74.76	75.49
Solyc03g115990.1.1	Tomato	plastid	74.52	75.24
Zm00001d032187_P001	Maize	plastid	71.15	75.13
TraesCS7B01G289400.1	Wheat	plastid	71.15	75.13
TraesCS1A01G348500.1	Wheat	plastid	71.63	74.87
KRH03482	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	73.56	74.82
PGSC0003DMT400050235	Potato	plastid	74.04	74.76
TraesCS1B01G363100.1	Wheat	plastid	71.39	74.62
TraesCS7A01G386600.1	Wheat	plastid	70.67	74.62
KRH56907	Soybean	endoplasmic reticulum	74.04	74.58
GSMUA_Achr5P23320_001	Banana	peroxisome	56.25	74.52
HORVU1Hr1G081550.1	Barley	plastid	71.39	74.44
TraesCS1D01G351500.1	Wheat	golgi, plastid	70.91	74.12
VIT_14s0108g00870.t01	Wine grape	plastid	75.96	73.83
Bra019504.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	27.88	72.96
CDY21789	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	27.88	72.96
CDY61271	Canola	plastid	69.95	72.75
AT3G47520.1	Thale cress	plastid	69.95	72.21
Bra018137.1-P	Field mustard	plastid	69.47	71.89
TraesCS7D01G383100.1	Wheat	plastid, vacuole	70.91	71.08
HORVU7Hr1G091760.2	Barley	mitochondrion	71.88	64.44
CDY47402	Canola	plastid	70.43	62.34
GSMUA_Achr5P02000_001	Banana	unclear	49.28	57.58
GSMUA_Achr4P08580_001	Banana	mitochondrion	47.6	57.06
GSMUA_AchrUn_...	Banana	mitochondrion, unclear	47.6	56.9
GSMUA_Achr4P01380_001	Banana	plasma membrane	47.6	55.62
CDX98040	Canola	cytosol	20.67	51.5
CDY19424	Canola	cytosol	19.71	48.24
AT3G53910.1	Thale cress	cytosol	12.5	48.15
CDX77861	Canola	plastid	31.49	45.8
Bra019790.1-P	Field mustard	plastid	35.34	37.6

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:23.1.3.4.3	Gene3D:3.40.50.720	Gene3D:3.90.110.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0006108	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0016615	GO:GO:0016616	GO:GO:0030060	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr7G11540_001	EnsemblPlants:GSMUA_Achr7P11540_001	EnsemblPlants:GSMUA_Achr7T11540_001	InterPro:IPR015955	InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N
InterPro:Lactate_DH/Glyco_Ohase_4_C	UniProt:M0TGP2	InterPro:Malate_DH_AS	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00056
PFAM:PF02866	ScanProsite:PS00068	PANTHER:PTHR11540	PANTHER:PTHR11540:SF46	SUPFAM:SSF51735	SUPFAM:SSF56327
TIGRFAMs:TIGR01772	UniParc:UPI000296CB28	SEG:seg	:	:	:

Description

lactate/malate dehydrogenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G11540_001]

Coordinates

chr7:+:9203588..9205136

Molecular Weight (calculated)

43665.6 Da

IEP (calculated)

9.026

GRAVY (calculated)

0.112

Length

416 amino acids

Sequence
(BLAST)

001: MASVAGSALS VGSVASYGTQ IGLGAKPKPL HVNHNAPKLF KGFSGLKASS SVFCESETSF MGNGRHASVW ESFKPKLGKS NLRTKSQLVP QASSFKVAVL
101: GAAGGIGQPL SLLIKMSPLV SAVHLYDVAN VKGVAADLSH CNTPSQSLGF TGESELANSL KDVDVVVIPA GVPRKSGMTR DDLFNVNANI VKTLVEAVAD
201: NAPDAFIHII SNPVNSTVPL AAEVLKQKGV YDPKKLFGVT TLDVVRANTF VAQKKNLKLI DVDVPVVGGH AGITILPLLS KTRPSVTFTD EEAEELTVRI
301: QNAGTEVVEA KAGAGSATLS MAYAAARFVE SSLRALDGDG DVYECSFVQS DITELPFFAS RVKLSRKGVE AVISSDLQGL TNYEAKALDA LKPELKASIE
401: KGMAFVHKRM AAVASV

Best Arabidopsis Sequence Match ( AT3G47520.1 )
(BLAST)

001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN

Arabidopsis Description

MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.