Factsheet for TraesCS7B01G289400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G386600.1	Wheat	plastid	97.46	97.46
TraesCS7D01G383100.1	Wheat	plastid, vacuole	98.22	93.25
TraesCS1B01G363100.1	Wheat	plastid	92.64	91.71
Os08t0434300-01	Rice	plastid	82.74	91.57
Solyc09g091070.1.1	Tomato	nucleus	64.97	85.91
Os01t0829800-01	Rice	plastid	86.04	85.61
OQU80513	Sorghum	plastid	84.52	84.52
Zm00001d032187_P001	Maize	plastid	83.5	83.5
Zm00001d050409_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	84.01	83.38
HORVU7Hr1G091760.2	Barley	mitochondrion	96.7	82.11
GSMUA_Achr6P02650_001	Banana	plastid	78.43	74.28
GSMUA_Achr5P23320_001	Banana	peroxisome	58.12	72.93
VIT_17s0000g06270.t01	Wine grape	plastid	75.89	72.4
PGSC0003DMT400065411	Potato	plastid	75.63	72.33
PGSC0003DMT400030247	Potato	plastid	75.63	72.33
Bra019504.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	29.19	72.33
AT3G47520.1	Thale cress	plastid	73.86	72.21
CDY61271	Canola	plastid	73.1	72.0
CDY21789	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	28.93	71.7
GSMUA_Achr7P11540_001	Banana	plastid	75.13	71.15
Bra018137.1-P	Field mustard	plastid	72.59	71.14
PGSC0003DMT400050235	Potato	plastid	74.37	71.12
KRH56907	Soybean	endoplasmic reticulum	74.37	70.94
KRH03482	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	73.6	70.9
Solyc03g115990.1.1	Tomato	plastid	74.11	70.87
VIT_14s0108g00870.t01	Wine grape	plastid	76.9	70.79
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	62.69	66.04
CDY47402	Canola	plastid	73.35	61.49
TraesCS3B01G265000.1	Wheat	golgi, mitochondrion, unclear	52.28	60.59
TraesCS1B01G443200.1	Wheat	extracellular, mitochondrion	50.0	57.77
TraesCS5B01G012400.1	Wheat	cytosol	52.28	57.54
CDX98040	Canola	cytosol	21.83	51.5
TraesCS5B01G412500.1	Wheat	plastid	48.48	51.21
CDY19424	Canola	cytosol	20.3	47.06
CDX77861	Canola	plastid	31.73	43.71
AT3G53910.1	Thale cress	cytosol	11.93	43.52
Bra019790.1-P	Field mustard	plastid	37.56	37.85

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:23.1.3.4.3	Gene3D:3.40.50.720	Gene3D:3.90.110.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0019752	GO:GO:0030060	GO:GO:0055114	InterPro:IPR015955
InterPro:L-lactate/malate_DH	InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00056	PFAM:PF02866	PIRSF:PIRSF000102	PANTHER:PTHR11540	PANTHER:PTHR11540:SF46	SUPFAM:SSF51735
SUPFAM:SSF56327	TIGRFAMs:TIGR01772	EnsemblPlantsGene:TraesCS7B01G289400	EnsemblPlants:TraesCS7B01G289400.1	TIGR:cd01337	SEG:seg

Description

No Description!

Coordinates

chr7B:+:524919301..524920485

Molecular Weight (calculated)

40987.6 Da

IEP (calculated)

8.833

GRAVY (calculated)

0.164

Length

394 amino acids

Sequence
(BLAST)

001: MASSATISSV GAQAALVSKP RNHGISGLKA SSSISFELGS SFLGKTGSLR ASVTTRVAPK AKSAARILPE ASYKVAVLGA AGGIGQPLGL LIKMSPLVSE
101: LRLYDIANVK GVAADLSHCN TPSQVMDFTG PAELASCLKG VDVVVIPAGV PRKPGMTRDD LFNINAGIVK SLIEAVADNC PGAFIHIISN PVNSTVPIAA
201: EILKKKGVYN PKKLFGVSTL DVVRANTFVA QKKGLKLIDV DVPVVGGHAG ITILPLLSKT RPSVTFTDEE TEQLTKRIQN AGTEVVEAKA GAGSATLSMA
301: YAAARFVESS LRALAGDPDV YECTYVQSEL TELPFFASRV KLGKNGVESI ISSDLEGITE YEASALEALK PELKASIEKG IEFAHKQQGA AASV

Best Arabidopsis Sequence Match ( AT3G47520.1 )
(BLAST)

001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN

Arabidopsis Description

MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.