Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19424 | Canola | cytosol | 83.83 | 82.35 |
| Bra019790.1-P | Field mustard | plastid | 100.0 | 42.71 |
| CDY55842 | Canola | mitochondrion | 23.95 | 29.63 |
| CDY43430 | Canola | cytosol | 28.74 | 27.75 |
| CDY17513 | Canola | cytosol | 24.55 | 26.28 |
| Os08t0434300-01 | Rice | plastid | 53.29 | 25.0 |
| OQU80513 | Sorghum | plastid | 52.69 | 22.34 |
| GSMUA_Achr5P23320_001 | Banana | peroxisome | 41.92 | 22.29 |
| TraesCS7B01G289400.1 | Wheat | plastid | 51.5 | 21.83 |
| TraesCS7A01G386600.1 | Wheat | plastid | 51.5 | 21.83 |
| Os01t0829800-01 | Rice | plastid | 51.5 | 21.72 |
| Zm00001d050409_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 51.5 | 21.66 |
| TraesCS1A01G348500.1 | Wheat | plastid | 51.5 | 21.61 |
| TraesCS1D01G351500.1 | Wheat | golgi, plastid | 51.5 | 21.61 |
| HORVU1Hr1G081550.1 | Barley | plastid | 51.5 | 21.55 |
| CDY21789 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 20.36 | 21.38 |
| TraesCS1B01G363100.1 | Wheat | plastid | 50.9 | 21.36 |
| Zm00001d032187_P001 | Maize | plastid | 50.3 | 21.32 |
| GSMUA_Achr6P02650_001 | Banana | plastid | 52.69 | 21.15 |
| CDY61271 | Canola | plastid | 50.3 | 21.0 |
| GSMUA_Achr7P11540_001 | Banana | plastid | 51.5 | 20.67 |
| TraesCS7D01G383100.1 | Wheat | plastid, vacuole | 50.9 | 20.48 |
| CDY55845 | Canola | mitochondrion | 40.12 | 19.65 |
| CDY24107 | Canola | mitochondrion | 39.52 | 19.41 |
| CDY59402 | Canola | mitochondrion | 39.52 | 19.35 |
| CDY25868 | Canola | mitochondrion | 39.52 | 19.35 |
| CDY02518 | Canola | mitochondrion | 39.52 | 19.35 |
| CDY26002 | Canola | mitochondrion | 39.52 | 19.24 |
| HORVU7Hr1G091760.2 | Barley | mitochondrion | 52.69 | 18.97 |
| CDY21594 | Canola | cytosol | 39.52 | 18.44 |
| CDX89514 | Canola | cytosol | 38.92 | 18.41 |
| CDY44813 | Canola | cytosol | 38.92 | 18.16 |
| CDX85803 | Canola | plastid | 38.92 | 18.16 |
| CDY25631 | Canola | plastid | 38.32 | 18.13 |
| CDY47402 | Canola | plastid | 50.9 | 18.09 |
| CDY34030 | Canola | mitochondrion | 29.34 | 17.56 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 38.92 | 17.38 |
| CDX77861 | Canola | plastid | 22.75 | 13.29 |
| CDX69893 | Canola | cytosol | 39.52 | 11.96 |
Protein Annotations
| EnsemblPlants:CDX98040 | EnsemblPlantsGene:GSBRNA2T00105408001 | Gene3D:3.90.110.10 | GO:A0A078E7H8 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016616 | GO:GO:0055114 | InterPro:IPR015955 |
| InterPro:Lactate_DH/Glyco_Ohase_4_C | PANTHER:PTHR11540 | PANTHER:PTHR11540:SF46 | ProteinID:CDX98040 | ProteinID:CDX98040.1 | SUPFAM:SSF56327 |
| UniParc:UPI0004EF2073 | MapMan:35.1 | : | : | : | : |
Description
BnaA06g07910D
Coordinates
chrLK031902:+:655040..655651
Molecular Weight (calculated)
18721.6 Da
IEP (calculated)
4.524
GRAVY (calculated)
0.022
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAEVLKQRG VYDPKKLFGL MTPETELARA FVAERFVLDV EDVHVPVIGG HCSLTALPLF SKTTPHYFEA RGAERFVLSL LRALGGANDM FQCCFVESNM
101: FDDIPFFGST VKLGKKGVEA IIETDLEGLT EYEVKSLKYL KEDLIEDIEK GIEFAKNNSE VYETILV
101: FDDIPFFGST VKLGKKGVEA IIETDLEGLT EYEVKSLKYL KEDLIEDIEK GIEFAKNNSE VYETILV
001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN
Arabidopsis Description
MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.