Factsheet for GSMUA_Achr10P25750_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

plastid 4
mitochondrion 3
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid, secretory
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P11540_001	Banana	plastid	82.89	74.52
Solyc09g091070.1.1	Tomato	nucleus	56.95	71.48
Os08t0434300-01	Rice	plastid	63.9	67.13
VIT_17s0000g06270.t01	Wine grape	plastid	71.93	65.13
PGSC0003DMT400065411	Potato	plastid	70.59	64.08
PGSC0003DMT400030247	Potato	plastid	70.59	64.08
GSMUA_Achr6P02650_001	Banana	plastid	70.86	63.7
Os01t0829800-01	Rice	plastid	67.11	63.38
Zm00001d050409_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	66.58	62.72
TraesCS7B01G289400.1	Wheat	plastid	66.04	62.69
OQU80513	Sorghum	plastid	65.78	62.44
KRH56907	Soybean	endoplasmic reticulum	68.45	61.99
TraesCS7A01G386600.1	Wheat	plastid	65.24	61.93
TraesCS1A01G348500.1	Wheat	plastid	65.78	61.81
KRH03482	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	67.38	61.61
TraesCS1B01G363100.1	Wheat	plastid	65.51	61.56
Zm00001d032187_P001	Maize	plastid	64.71	61.42
TraesCS1D01G351500.1	Wheat	golgi, plastid	65.24	61.31
VIT_14s0108g00870.t01	Wine grape	plastid	70.05	61.22
PGSC0003DMT400050235	Potato	plastid	67.11	60.92
Solyc03g115990.1.1	Tomato	plastid	67.11	60.92
HORVU1Hr1G081550.1	Barley	plastid	64.97	60.9
GSMUA_Achr5P23320_001	Banana	peroxisome	50.27	59.87
AT3G47520.1	Thale cress	plastid	63.9	59.31
TraesCS7D01G383100.1	Wheat	plastid, vacuole	65.78	59.28
CDY61271	Canola	plastid	63.1	59.0
Bra018137.1-P	Field mustard	plastid	62.57	58.21
HORVU7Hr1G091760.2	Barley	mitochondrion	66.58	53.66
CDY47402	Canola	plastid	63.1	50.21
GSMUA_Achr5P02000_001	Banana	unclear	45.72	48.03
AT3G53910.1	Thale cress	cytosol	13.64	47.22
GSMUA_AchrUn_...	Banana	mitochondrion, unclear	43.58	46.84
GSMUA_Achr4P08580_001	Banana	mitochondrion	42.78	46.11
GSMUA_Achr4P01380_001	Banana	plasma membrane	42.78	44.94
Bra019504.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	18.72	44.03
CDY21789	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	18.72	44.03
CDX77861	Canola	plastid	31.28	40.91
CDX98040	Canola	cytosol	17.38	38.92
CDY19424	Canola	cytosol	16.84	37.06
Bra019790.1-P	Field mustard	plastid	31.02	29.67

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.110.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0019752
GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G25750_001	EnsemblPlants:GSMUA_Achr10P25750_001	EnsemblPlants:GSMUA_Achr10T25750_001	InterPro:IPR015955	InterPro:L-lactate/malate_DH
InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	UniProt:M0RLE9	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00056
PFAM:PF02866	PIRSF:PIRSF000102	PANTHER:PTHR11540	PANTHER:PTHR11540:SF46	SUPFAM:SSF51735	SUPFAM:SSF56327
UniParc:UPI0002948434	SEG:seg	:	:	:	:

Description

lactate/malate dehydrogenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G25750_001]

Coordinates

chr10:+:29619765..29621401

Molecular Weight (calculated)

39228.2 Da

IEP (calculated)

6.878

GRAVY (calculated)

0.131

Length

374 amino acids

Sequence
(BLAST)

001: MLVSAASALY VSLVASYGTR IGLEPKAKAL HVTQKTPKLF KGFNGLKAAA SVSCESDTSF LGNGRNATVW ESFKPKLGRP NLRTKSQLKP QASSFKVAVL
101: GAAGGVGQPL ALLIKMSPLV SAVHLYDIAN VKGIAADLNH CNTPARVLDF TGESELASSL EGVDVVVIPA GIPQKPGMTC DDLFNVNANI VKSLMEAVAD
201: NAPDAFIHII SNPHLKLIDV SVPVIGGHDG ITILPLLSKT RPSVTFTDGE VEELTVRLQN AGTELVEGKA GAGSATLSMA YAAARFVESS LRALDGDGDV
301: YECSFVQSDL TELPFFASRV KLSRKGVEAV IPSDLQGLTD YEAKALEALK PELKASIEKG VSFVHKQTAA AASG

Best Arabidopsis Sequence Match ( AT3G47520.1 )
(BLAST)

001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN

Arabidopsis Description

MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.