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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY61271 Canola plastid 82.77 97.25
Solyc09g091070.1.1 Tomato nucleus 54.26 85.57
Os08t0434300-01 Rice plastid 60.21 79.49
CDY21789 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 26.81 79.25
KRH03482 Soybean endoplasmic reticulum, mitochondrion, nucleus, plastid 65.11 74.82
KRH56907 Soybean endoplasmic reticulum 65.11 74.09
GSMUA_Achr5P23320_001 Banana peroxisome 49.36 73.89
Solyc03g115990.1.1 Tomato plastid 64.47 73.54
PGSC0003DMT400050235 Potato plastid 64.47 73.54
VIT_17s0000g06270.t01 Wine grape plastid 64.47 73.37
TraesCS7B01G289400.1 Wheat plastid 61.49 73.35
Zm00001d050409_P001 Maize extracellular, mitochondrion, plasma membrane, plastid 61.91 73.3
OQU80513 Sorghum plastid 61.06 72.84
TraesCS7A01G386600.1 Wheat plastid 60.85 72.59
PGSC0003DMT400065411 Potato plastid 63.62 72.57
PGSC0003DMT400030247 Potato plastid 63.62 72.57
Os01t0829800-01 Rice plastid 61.06 72.47
TraesCS1A01G348500.1 Wheat plastid 61.06 72.11
TraesCS1D01G351500.1 Wheat golgi, plastid 61.06 72.11
HORVU1Hr1G081550.1 Barley plastid 61.06 71.93
TraesCS1B01G363100.1 Wheat plastid 60.85 71.86
Zm00001d032187_P001 Maize plastid 60.0 71.57
VIT_14s0108g00870.t01 Wine grape plastid 64.89 71.26
GSMUA_Achr6P02650_001 Banana plastid 62.98 71.15
GSMUA_Achr7P11540_001 Banana plastid 62.34 70.43
TraesCS7D01G383100.1 Wheat plastid, vacuole 61.91 70.12
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 50.21 63.1
HORVU7Hr1G091760.2 Barley mitochondrion 61.28 62.07
CDY59402 Canola mitochondrion 43.83 60.41
CDY24107 Canola mitochondrion 43.62 60.29
CDY02518 Canola mitochondrion 43.62 60.12
CDY26002 Canola mitochondrion 43.83 60.06
CDY55845 Canola mitochondrion 43.4 59.82
CDY25868 Canola mitochondrion 43.4 59.82
CDY55842 Canola mitochondrion 17.02 59.26
CDY21594 Canola cytosol 45.11 59.22
CDY44813 Canola cytosol 44.68 58.66
CDX85803 Canola plastid 44.68 58.66
CDX89514 Canola cytosol 44.04 58.64
CDY25631 Canola plastid 43.83 58.36
CDX98040 Canola cytosol 18.09 50.9
CDY43430 Canola cytosol 17.87 48.55
CDX77861 Canola plastid 29.15 47.9
CDY17513 Canola cytosol 15.53 46.79
CDY19424 Canola cytosol 16.81 46.47
AT3G53910.1 Thale cress cytosol 10.21 44.44
CDX69893 Canola cytosol 45.96 39.13
CDY34030 Canola mitochondrion 18.72 31.54
Protein Annotations
KEGG:00020+1.1.1.37KEGG:00270+1.1.1.37KEGG:00620+1.1.1.37KEGG:00630+1.1.1.37KEGG:00680+1.1.1.37KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37MapMan:23.1.3.4.3Gene3D:3.40.50.720Gene3D:3.90.110.10GO:A0A078IB61UniProt:A0A078IB61
EnsemblPlants:CDY47402ProteinID:CDY47402ProteinID:CDY47402.1GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005975GO:GO:0006091GO:GO:0006099GO:GO:0006108GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016615GO:GO:0016616
GO:GO:0030060GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00087308001InterPro:IPR015955InterPro:Lactate/malate_DH_CInterPro:Lactate/malate_DH_N
InterPro:Lactate_DH/Glyco_Ohase_4_CInterPro:Malate_DH_ASInterPro:Malate_DH_type1InterPro:NAD(P)-bd_dom_sfPFAM:PF00056PFAM:PF02866
ScanProsite:PS00068PANTHER:PTHR11540PANTHER:PTHR11540:SF46MetaCyc:PWY-1622MetaCyc:PWY-5392MetaCyc:PWY-561
MetaCyc:PWY-5690MetaCyc:PWY-5913MetaCyc:PWY-6728MetaCyc:PWY-6969MetaCyc:PWY-7115MetaCyc:PWY-7383
SUPFAM:SSF51735SUPFAM:SSF56327TIGRFAMs:TIGR01772TMHMM:TMhelixUniParc:UPI0004EEEF36SEG:seg
Description
BnaCnng15110DBnaCnng15110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB61]
Coordinates
chrLK032714:-:16815..19997
Molecular Weight (calculated)
50136.5 Da
IEP (calculated)
9.708
GRAVY (calculated)
0.049
Length
470 amino acids
Sequence
(BLAST)
001: MVNPRDTLPP RAGEKKQNPP LVFILSFFLS TSSPTYLPLI SFVSLSLTQT LESLRRKLLK RLYLSRLELS SKMAATSAAS SISIGSNLSR ATSSSSRAQA
101: VNFNYSLPRF TALRSSTLLS GPESSSFAKS LRGSVMKSQS TDTKPYGLNI NASYKVAVLG AAGGIGQPLS LLIKMSPLVS TLHLYDIANV KGVAADLSHC
201: NTPSQVRDFT GPAELADCLK DVNVVVIPAG VPRKPGMTRD DLFNINAGIV KTLVEAVADN CPNAFIHIIS NPVNSTVPIA AEVLKKKGVY DPKKLFGVTT
301: LDVVRANTFV SQKKNLKLID VDVPVIGGHA GITILPLLSK TKPSVSFTDE EIEKLTLRIQ NAGTEVVDAK AGAGSATLSM AYAAARFVES SLRALDGDGD
401: VYECSFVDST LTDLPFFASR IKIGRNGVEA VIESDLQGLT EYEQKALEAL KPELKASIEK GVAFANKPAN
Best Arabidopsis Sequence Match ( AT3G47520.1 )
(BLAST)
001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN
Arabidopsis Description
MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.