CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017186_P001	Maize	extracellular	96.21	96.64
Os02t0611800-01	Rice	plasma membrane	84.38	85.52
TraesCS6A01G232200.1	Wheat	cytosol	82.37	83.48
TraesCS6D01G203000.1	Wheat	cytosol	82.37	83.48
TraesCS6B01G249400.1	Wheat	cytosol, golgi	81.92	83.22
HORVU6Hr1G056230.2	Barley	cytosol	81.92	83.22
EES11073	Sorghum	mitochondrion	80.13	81.41
GSMUA_Achr4P01990_001	Banana	mitochondrion	68.3	70.18
CDY05770	Canola	cytosol	63.17	65.36
CDY31956	Canola	cytosol	62.95	65.13
Bra036480.1-P	Field mustard	cytosol, peroxisome, plastid	61.61	65.09
VIT_09s0018g01190.t01	Wine grape	cytosol	62.05	64.8
AT5G48930.1	Thale cress	cytosol	62.05	64.2
KRH44584	Soybean	cytosol	61.16	63.87
PGSC0003DMT400036695	Potato	cytosol	60.49	63.62
Solyc03g117600.2.1	Tomato	cytosol, extracellular	61.38	63.22
KRH23680	Soybean	cytosol, nucleus	61.16	62.41
KRH09635	Soybean	cytosol	50.67	60.7
CDY44162	Canola	plastid	57.37	60.05
Bra033526.1-P	Field mustard	mitochondrion	57.14	59.81
CDY22880	Canola	mitochondrion	57.14	59.81
KRH47315	Soybean	endoplasmic reticulum	61.38	59.14
EER98920	Sorghum	cytosol	39.73	41.11
EER98918	Sorghum	cytosol, peroxisome, plastid	40.62	40.18
EES07672	Sorghum	cytosol	39.29	39.02
EES15064	Sorghum	cytosol	37.72	38.15
EER89344	Sorghum	cytosol	36.83	37.76
KXG19490	Sorghum	cytosol	36.61	37.7
EER87979	Sorghum	cytosol	36.61	37.7
KXG31953	Sorghum	cytosol, endoplasmic reticulum, peroxisome	35.49	36.64
EES15065	Sorghum	cytosol, peroxisome, plastid	36.16	36.32
KXG31952	Sorghum	cytosol	32.81	35.42
KXG31858	Sorghum	peroxisome	34.15	35.42
EER96600	Sorghum	peroxisome	33.71	34.71
KXG31859	Sorghum	peroxisome	33.26	34.1
KXG31860	Sorghum	cytosol, peroxisome, plastid	33.04	33.95
OQU75613	Sorghum	cytosol, peroxisome, plastid	33.04	33.95
KXG31861	Sorghum	cytosol, peroxisome, plastid	33.04	33.64
EES02456	Sorghum	cytosol, peroxisome, plastid	33.04	32.67
EES02467	Sorghum	cytosol, peroxisome, plastid	32.14	32.21
KXG31863	Sorghum	plastid	25.89	31.02
OQU86302	Sorghum	mitochondrion	16.52	30.2
OQU83825	Sorghum	peroxisome, plastid	29.24	29.57
OQU91195	Sorghum	cytosol	29.69	29.04
OQU89853	Sorghum	cytosol	27.23	27.54
EES10710	Sorghum	cytosol	25.45	24.89
EER88164	Sorghum	cytosol	18.75	24.21
EES09214	Sorghum	cytosol, peroxisome, plastid	23.88	23.62

Protein Annotations

MapMan:21.6.1.1	Gene3D:3.30.559.10	PDB:4KE4	PDB:4KEC	EntrezGene:8059672	UniProt:C5XXB7
InterPro:CAT-like_dom_sf	EnsemblPlants:EES05411	ProteinID:EES05411	ProteinID:EES05411.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:IPR023213	PFAM:PF02458	PANTHER:PTHR31642	PANTHER:PTHR31642:SF116
EnsemblPlantsGene:SORBI_3004G212300	SUPFAM:SSF52777	unigene:Sbi.11300	InterPro:Transferase	UniParc:UPI0001A852D8	RefSeq:XP_002452435.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:56194958..56201627

Molecular Weight (calculated)

48832.5 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.051

Length

448 amino acids

Sequence
(BLAST)

001: MKITVRGSEM VYPAAETPRR RLWNSGPDLV VPRFHTPSVY FFRRRDADGN DLTAADGSFF DGARMRRALA EALVPFYPMA GRLARDEDGR VEIDCNAAGV
101: LFQEADAPDA TIDYFGDFAP TMELKRLIPT VDFSDDTAFP LLVLQVTHFK CGGVAIGVGM QHHVADGFSG LHFINSWADL CRGVPIAVMP FIDRSLLRAR
201: DPPAPVYPHV EYQPAPAMLS SEPPQAALTA KPATPPAAVA IFKLSRAELG RLRSQVPARE REGAPRFSTY AVLAAHVWRC ASLARGLPAD QPTKLYCATD
301: GRQRLQPPLP EGYFGNVIFT ATPLANAGTV TAGVAEGAAV IQAALDRMDD GYCRSALDYL ELQPDLSALV RGAHTFRCPN LGLTSWVRLP IHDADFGWGR
401: PVFMGPGGIA YEGLAFVLPS ANRDGSLSVA ISLQAEHMEK FRKLIYDF

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.