CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22880	Canola	mitochondrion	98.36	98.36
CDY05770	Canola	cytosol	83.18	82.22
CDY31956	Canola	cytosol	82.94	81.99
AT5G48930.1	Thale cress	cytosol	81.07	80.14
VIT_09s0018g01190.t01	Wine grape	cytosol	71.5	71.33
KRH44584	Soybean	cytosol	68.46	68.3
Solyc03g117600.2.1	Tomato	cytosol, extracellular	69.16	68.05
PGSC0003DMT400036695	Potato	cytosol	67.52	67.84
KRH23680	Soybean	cytosol, nucleus	67.52	65.83
KRH47315	Soybean	endoplasmic reticulum	68.93	63.44
KRH09635	Soybean	cytosol	55.37	63.37
GSMUA_Achr5P04550_001	Banana	cytosol	60.75	62.05
GSMUA_Achr4P01990_001	Banana	mitochondrion	61.68	60.55
GSMUA_Achr10P...	Banana	mitochondrion	61.68	60.0
Os04t0500700-02	Rice	mitochondrion	60.51	58.6
EES11073	Sorghum	mitochondrion	60.28	58.5
TraesCS2D01G354300.1	Wheat	mitochondrion	59.81	58.45
TraesCS2B01G374600.1	Wheat	mitochondrion	59.35	57.99
TraesCS2A01G354500.1	Wheat	mitochondrion	59.58	57.69
Os02t0611800-01	Rice	plasma membrane	59.58	57.69
Zm00001d017186_P001	Maize	extracellular	60.05	57.62
EES05411	Sorghum	cytosol	60.05	57.37
TraesCS6B01G249400.1	Wheat	cytosol, golgi	58.64	56.92
TraesCS6D01G203000.1	Wheat	cytosol	58.64	56.79
TraesCS6A01G232200.1	Wheat	cytosol	58.64	56.79
HORVU6Hr1G056230.2	Barley	cytosol	58.41	56.69
HORVU1Hr1G081430.3	Barley	cytosol, peroxisome, plastid	48.6	54.59
Zm00001d003129_P001	Maize	mitochondrion	18.69	54.42
TraesCS1D01G021600.1	Wheat	mitochondrion	56.07	54.42
TraesCS3B01G002000.1	Wheat	mitochondrion	55.37	54.36
TraesCS3D01G525000.1	Wheat	mitochondrion	55.61	53.85
TraesCS3A01G517500.1	Wheat	mitochondrion	55.61	53.36
TraesCS1B01G005300.1	Wheat	mitochondrion	44.16	47.49
HORVU2Hr1G086380.1	Barley	cytosol, nucleus, plastid	59.58	43.81
CDX88645	Canola	cytosol, golgi, nucleus	43.69	42.02
CDX88644	Canola	cytosol	42.06	40.54
CDY56515	Canola	cytosol	33.18	37.37
CDY62143	Canola	cytosol	33.18	37.37
CDY66506	Canola	cytosol	37.15	35.97
CDY03367	Canola	cytosol	35.75	33.92
CDY11845	Canola	cytosol	39.49	17.77

Protein Annotations

EnsemblPlants:CDY44162	EnsemblPlantsGene:GSBRNA2T00079630001	Gene3D:3.30.559.10	GO:A0A078I284	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF118	PFAM:PF02458	ProteinID:CDY44162	ProteinID:CDY44162.1	UniParc:UPI0004EB9D9F	UniProt:A0A078I284
MapMan:21.6.1.1	:	:	:	:	:

Description

BnaC01g22120DBnaC01g22120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I284]

Coordinates

chrLK032581:-:43713..45427

Molecular Weight (calculated)

47400.8 Da

IEP (calculated)

6.890

GRAVY (calculated)

-0.006

Length

428 amino acids

Sequence
(BLAST)

001: MKINIRNAAM VRPAAETPST YLWNSNVDLI IARYHSSSVY FYRSNGASNF FDPQVLKEAL AKALVPFYPF AGSLRRDENG RIEIDCNAAG ALFIVADTPS
101: VIDDLGDFAP SVNLSKLVPH VDYSPGIHTF PLLVLQVTFF KCGGVSLGVG IQHHVSDGLS SIHFINSWSD MARGLDLTLP PFIDRTLLRA REPPHPTFHH
201: VEYQPSPSMK IPLHPDNTTV SIFKLSRDLL VALKAKAKED GNPVSYSSYE TLAAHVWRSV TKARAFPDDQ VTKLYIATDG RSRLRPQLPP GYLGNVVFTA
301: TPLAAAGDLL SKPTSYVAGL IHDVLARMDD EYLRSALDYL EMQPDLSALI RGAHTYNCPN LGITSWVRLP IYDADFGWGR PVFMGPSVIA FEGLSFVLPS
401: PTNDGSLSLF IALRTEHMKL FEKYLYEI

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.