Factsheet for Solyc03g117600.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036695	Potato	cytosol	95.86	97.89
KRH44584	Soybean	cytosol	79.08	80.19
AT5G48930.1	Thale cress	cytosol	79.31	79.68
Bra036480.1-P	Field mustard	cytosol, peroxisome, plastid	76.78	78.77
CDY05770	Canola	cytosol	78.16	78.52
CDY31956	Canola	cytosol	78.16	78.52
VIT_09s0018g01190.t01	Wine grape	cytosol	77.24	78.32
KRH23680	Soybean	cytosol, nucleus	75.86	75.17
KRH47315	Soybean	endoplasmic reticulum	79.08	73.98
KRH09635	Soybean	cytosol	60.69	70.59
CDY22880	Canola	mitochondrion	68.74	69.86
Bra033526.1-P	Field mustard	mitochondrion	68.51	69.63
CDY44162	Canola	plastid	68.05	69.16
GSMUA_Achr5P04550_001	Banana	cytosol	65.06	67.54
Zm00001d003129_P001	Maize	mitochondrion	22.07	65.31
GSMUA_Achr4P01990_001	Banana	mitochondrion	65.29	65.14
GSMUA_Achr10P...	Banana	mitochondrion	65.75	65.0
Os04t0500700-02	Rice	mitochondrion	65.06	64.03
Os02t0611800-01	Rice	plasma membrane	64.14	63.12
TraesCS6D01G203000.1	Wheat	cytosol	64.14	63.12
HORVU6Hr1G056230.2	Barley	cytosol	63.91	63.04
TraesCS6B01G249400.1	Wheat	cytosol, golgi	63.91	63.04
TraesCS2D01G354300.1	Wheat	mitochondrion	63.45	63.01
TraesCS6A01G232200.1	Wheat	cytosol	63.91	62.9
EES11073	Sorghum	mitochondrion	63.68	62.81
TraesCS2B01G374600.1	Wheat	mitochondrion	62.76	62.33
TraesCS2A01G354500.1	Wheat	mitochondrion	63.22	62.22
Zm00001d017186_P001	Maize	extracellular	63.68	62.11
EES05411	Sorghum	cytosol	63.22	61.38
Solyc07g005760.2.1	Tomato	cytosol	58.62	59.3
TraesCS1D01G021600.1	Wheat	mitochondrion	59.54	58.73
TraesCS3B01G002000.1	Wheat	mitochondrion	57.7	57.57
HORVU1Hr1G081430.3	Barley	cytosol, peroxisome, plastid	50.34	57.48
TraesCS3D01G525000.1	Wheat	mitochondrion	58.16	57.24
TraesCS3A01G517500.1	Wheat	mitochondrion	57.7	56.28
TraesCS1B01G005300.1	Wheat	mitochondrion	46.21	50.5
HORVU2Hr1G086380.1	Barley	cytosol, nucleus, plastid	63.22	47.25
Solyc07g015960.1.1	Tomato	cytosol	36.09	34.81
Solyc11g066640.1.1	Tomato	cytosol	31.72	31.44
Solyc06g074710.1.1	Tomato	cytosol	31.95	31.31
Solyc11g071480.1.1	Tomato	cytoskeleton, cytosol, peroxisome	29.66	29.12
Solyc11g071470.1.1	Tomato	cytosol	29.66	29.12

Protein Annotations

MapMan:21.6.1.1	Gene3D:3.30.559.10	InterPro:CAT-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009809	GO:GO:0009963	GO:GO:0009987	GO:GO:0010252	GO:GO:0016020
GO:GO:0016740	GO:GO:0016747	GO:GO:0019748	GO:GO:0047172	GO:GO:0047205	InterPro:IPR023213
UniProt:K4BLR2	PFAM:PF02458	PANTHER:PTHR31642	PANTHER:PTHR31642:SF116	EnsemblPlantsGene:Solyc03g117600.2	EnsemblPlants:Solyc03g117600.2.1
InterPro:Transferase	UniParc:UPI00027676B6	:	:	:	:

Description

No Description!

Coordinates

chr3:+:66715754..66721151

Molecular Weight (calculated)

48273.7 Da

IEP (calculated)

5.619

GRAVY (calculated)

-0.205

Length

435 amino acids

Sequence
(BLAST)

001: MKIEVKNSTM VQPATETPQL RLWNSNVDLV VPNFHTPSVY FYRPTGSPNF FDGKVVKEAL SKALVPFYPM AGRLCRDEDG RIEIDCKGQG VLFVEAESDG
101: VVDDFGDFAP TLELRRLIPA VDYSQGIESY ALLVLQITQF KCGGVSLGVG MQHHAADGAS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPQFPH
201: VEYQPPPTLK TTEENVPNAE TVPETSVSIF KLTRDQINTL KAKSKEDGNT VNYSSYEMLA GHVWRSTCMA RGLTQDQETK LYIATDGRAR LRPSLPPGYF
301: GNVIFTATPV AVAGDLQSKP IWYAASKIHD QLAIMDNDYL RSALDYLELQ PDLKALVRGA HTFKCPNLGI TSWSRLPIHD ADFGWGRPIF MGPGGIAYEG
401: LSFILPSPIN DGSQSVAISL QAEHMKLFEK FLYDI

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.