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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 1
  • plastid 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G374600.1 Wheat mitochondrion 73.54 97.72
TraesCS2D01G354300.1 Wheat mitochondrion 72.85 96.8
TraesCS2A01G354500.1 Wheat mitochondrion 73.37 96.61
Os04t0500700-02 Rice mitochondrion 68.21 89.82
EES11073 Sorghum mitochondrion 66.67 87.98
Zm00001d003129_P001 Maize mitochondrion 21.48 85.03
HORVU6Hr1G056230.2 Barley cytosol 62.89 82.99
HORVU1Hr1G081430.3 Barley cytosol, peroxisome, plastid 49.66 75.85
GSMUA_Achr4P01990_001 Banana mitochondrion 53.61 71.56
CDY31956 Canola cytosol 48.28 64.9
Bra036480.1-P Field mustard cytosol, peroxisome, plastid 47.25 64.86
AT5G48930.1 Thale cress cytosol 48.11 64.67
CDY05770 Canola cytosol 47.94 64.43
KRH44584 Soybean cytosol 47.25 64.1
VIT_09s0018g01190.t01 Wine grape cytosol 47.08 63.87
PGSC0003DMT400036695 Potato cytosol 46.39 63.38
Solyc03g117600.2.1 Tomato cytosol, extracellular 47.25 63.22
KRH23680 Soybean cytosol, nucleus 47.25 62.64
KRH09635 Soybean cytosol 39.35 61.23
Bra033526.1-P Field mustard mitochondrion 43.81 59.58
CDY22880 Canola mitochondrion 43.81 59.58
CDY44162 Canola plastid 43.81 59.58
KRH47315 Soybean endoplasmic reticulum 47.25 59.14
HORVU5Hr1G064280.1 Barley plastid 29.55 39.27
HORVU7Hr1G030670.1 Barley mitochondrion 30.24 38.18
HORVU7Hr1G118090.1 Barley cytosol 28.52 37.9
HORVU7Hr1G030780.1 Barley cytosol 27.66 37.44
HORVU7Hr1G030740.3 Barley cytosol 27.15 36.49
HORVU5Hr1G108900.1 Barley peroxisome 27.49 35.63
HORVU6Hr1G066420.1 Barley cytosol, peroxisome, plastid 26.98 34.73
HORVU0Hr1G023570.1 Barley cytosol, peroxisome, plastid 27.15 34.73
HORVU3Hr1G097120.2 Barley cytosol, plasma membrane 26.12 34.23
HORVU2Hr1G112120.3 Barley mitochondrion 14.43 33.87
HORVU6Hr1G012740.1 Barley peroxisome 24.91 33.1
HORVU6Hr1G081260.1 Barley peroxisome 26.98 33.05
HORVU2Hr1G109430.2 Barley cytosol 22.68 30.14
HORVU2Hr1G109590.1 Barley cytosol 16.32 29.41
HORVU6Hr1G088480.1 Barley extracellular, plasma membrane 23.2 28.66
HORVU3Hr1G027720.1 Barley cytosol 6.01 28.0
HORVU4Hr1G077720.7 Barley cytosol, extracellular, peroxisome 20.45 27.61
HORVU6Hr1G088530.1 Barley cytosol 7.73 27.27
HORVU5Hr1G084810.1 Barley cytosol 19.93 27.04
HORVU5Hr1G079580.1 Barley mitochondrion 20.1 26.83
HORVU5Hr1G077720.1 Barley mitochondrion 20.1 26.83
HORVU5Hr1G084820.2 Barley cytosol 19.93 26.73
HORVU4Hr1G004050.1 Barley cytosol 20.27 26.58
HORVU4Hr1G077790.1 Barley endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 20.27 26.4
HORVU4Hr1G077780.1 Barley peroxisome 20.62 26.32
HORVU2Hr1G125370.1 Barley cytosol 19.24 26.23
HORVU7Hr1G030410.3 Barley peroxisome 20.62 25.97
HORVU2Hr1G125270.1 Barley peroxisome 19.24 25.45
HORVU5Hr1G084980.1 Barley cytosol 19.76 24.78
HORVU2Hr1G109470.1 Barley cytosol 8.42 24.75
HORVU6Hr1G073010.3 Barley cytosol 18.73 24.66
HORVU1Hr1G019380.2 Barley cytosol, mitochondrion, plasma membrane 19.42 24.35
HORVU5Hr1G044390.1 Barley cytosol, peroxisome, plastid 18.21 23.71
HORVU2Hr1G002500.2 Barley cytosol 21.31 22.1
HORVU2Hr1G124070.1 Barley cytosol 6.36 12.33
Protein Annotations
EnsemblPlants:HORVU2Hr1G086380.1EnsemblPlantsGene:HORVU2Hr1G086380Gene3D:3.30.559.10GO:GO:0003674GO:GO:0003824GO:GO:0016740
GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:TransferasePANTHER:PTHR31642PANTHER:PTHR31642:SF116
PFAM:PF02458SEG:segSUPFAM:SSF52777UniParc:UPI000B474B50UniProt:A0A287ISF0MapMan:21.6.1.1
Description
No Description!
Coordinates
chrchr2H:-:622777432..622782699
Molecular Weight (calculated)
63384.1 Da
IEP (calculated)
8.955
GRAVY (calculated)
-0.255
Length
582 amino acids
Sequence
(BLAST)
001: HPDLRVRGDS QTCPVCLSGR PSAPPHRPLP RYAESAPSVR RGGEPCPSAK QSHPACLPAC CLSSLPLRPR PRPHPTNSPP IAATQHSTAQ PSRPHGAYIS
101: RSTPNSPTSC SPPRAAATTI QPSRRLCRRR RRRSDPPSVL PSSKMAITVR RSTMVRPAVE RPRERLWNSN LDLVVPRFHT PSVYFYRRPE AGADGFFDAD
201: RMRLALADAL VPFYPMAGRL ARDEDGRVEI DCSGEGVLFV EADAPTATVD DYGDFAPTMD LKRLIPPVDY TDDISSFPLL VLQVTYFKCG GVSLGVGMQH
301: HVADGMSGLH FINSWSDLCR GVKIAVMPFI DRTLVRARDP PTPSYPHVEY QPAPAMLSSV PQALGGKPVP PPTAVDIFKL TRSELGRLRS QLPTGEGAPR
401: FSTYAVLAAH VWRCVSLARN LAPEQPTKLY CATDGRQRLQ PPLPEGYFGN VIFTATPLAE AGKVTSGLAE GAAVIQGALD RMTGDYCQSA LDYLEMQPDL
501: SALVRGAHTF RCPNLGLTSW VRLPIHDADF GWGRPVFMGP GGIAYEGLAF VLPSASKDGS LSIAISLQAE HMEKFRKLIL DV
Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.