Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G337000.1 Wheat cytosol 89.44 94.1
TraesCS5D01G342700.1 Wheat cytosol 89.22 93.88
TraesCS5B01G337100.1 Wheat cytosol 89.01 93.65
TraesCS5A01G338700.1 Wheat cytosol 88.58 93.62
TraesCS5D01G342800.1 Wheat cytosol 88.15 93.17
TraesCS5A01G338600.1 Wheat cytosol 88.15 92.74
Os09t0544000-01 Rice cytosol 71.34 73.23
HORVU5Hr1G084820.2 Barley cytosol 66.38 70.97
HORVU5Hr1G079580.1 Barley mitochondrion 66.16 70.41
HORVU5Hr1G077720.1 Barley mitochondrion 66.16 70.41
HORVU5Hr1G084810.1 Barley cytosol 64.22 69.46
Zm00001d003856_P001 Maize cytosol 65.73 68.08
EES10710 Sorghum cytosol 66.59 67.47
HORVU3Hr1G027720.1 Barley cytosol 14.44 53.6
Solyc11g066640.1.1 Tomato cytosol 50.22 53.08
PGSC0003DMT400001145 Potato cytosol 50.0 52.61
GSMUA_Achr8P15170_001 Banana cytosol 43.75 52.59
Solyc06g074710.1.1 Tomato cytosol 49.78 52.03
PGSC0003DMT400018441 Potato cytosol 49.78 51.91
GSMUA_Achr8P03170_001 Banana cytosol 41.59 51.33
HORVU2Hr1G109590.1 Barley cytosol 35.56 51.08
GSMUA_Achr8P03190_001 Banana cytosol 37.5 50.14
HORVU4Hr1G004050.1 Barley cytosol 47.84 50.0
Solyc11g071470.1.1 Tomato cytosol 46.98 49.21
HORVU2Hr1G109430.2 Barley cytosol 45.69 48.4
Solyc11g071480.1.1 Tomato cytoskeleton, cytosol, peroxisome 45.69 47.86
GSMUA_Achr8P03180_001 Banana plastid 42.03 47.68
GSMUA_Achr8P03210_001 Banana cytosol 35.99 47.44
GSMUA_Achr8P03200_001 Banana cytosol 34.7 46.67
HORVU2Hr1G002500.2 Barley cytosol 55.39 45.81
HORVU6Hr1G088530.1 Barley cytosol 15.52 43.64
HORVU6Hr1G088480.1 Barley extracellular, plasma membrane 43.1 42.46
PGSC0003DMT400048126 Potato cytosol 40.3 41.46
HORVU4Hr1G077720.7 Barley cytosol, extracellular, peroxisome 36.42 39.21
HORVU2Hr1G109470.1 Barley cytosol 16.16 37.88
PGSC0003DMT400048130 Potato cytoskeleton, cytosol, peroxisome 46.34 37.79
HORVU2Hr1G125370.1 Barley cytosol 32.76 35.6
HORVU4Hr1G077790.1 Barley endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 34.27 35.57
HORVU4Hr1G077780.1 Barley peroxisome 34.7 35.31
HORVU2Hr1G125270.1 Barley peroxisome 33.41 35.23
HORVU1Hr1G019380.2 Barley cytosol, mitochondrion, plasma membrane 34.27 34.27
HORVU7Hr1G030410.3 Barley peroxisome 34.05 34.2
HORVU6Hr1G073010.3 Barley cytosol 31.68 33.26
HORVU5Hr1G044390.1 Barley cytosol, peroxisome, plastid 30.17 31.32
CDY56515 Canola cytosol 23.06 28.16
CDY62143 Canola cytosol 23.06 28.16
HORVU5Hr1G064280.1 Barley plastid 26.51 28.08
Bra024450.1-P Field mustard cytosol 22.84 27.89
VIT_11s0103g00200.t01 Wine grape cytosol 27.37 27.85
HORVU1Hr1G081430.3 Barley cytosol, peroxisome, plastid 22.63 27.56
HORVU7Hr1G118090.1 Barley cytosol 25.86 27.4
HORVU6Hr1G056230.2 Barley cytosol 25.65 26.98
HORVU7Hr1G030670.1 Barley mitochondrion 26.72 26.9
KRH02826 Soybean cytosol 26.29 26.81
KRH46099 Soybean cytosol, plastid 25.86 26.55
KRH46097 Soybean cytosol 12.72 26.11
HORVU5Hr1G108900.1 Barley peroxisome 25.22 26.06
HORVU2Hr1G124070.1 Barley cytosol 16.59 25.67
KRG98867 Soybean endoplasmic reticulum 24.78 25.39
KRH32581 Soybean cytosol 23.49 25.35
KRG98873 Soybean mitochondrion 25.22 25.32
KRH32575 Soybean cytosol 24.35 25.22
KRH02825 Soybean cytosol 25.0 25.22
KRG89744 Soybean cytosol 25.22 25.22
CDY66506 Canola cytosol 23.92 25.11
VIT_11s0037g00570.t01 Wine grape mitochondrion 23.92 24.94
HORVU7Hr1G030780.1 Barley cytosol 23.06 24.88
VIT_11s0037g00580.t01 Wine grape mitochondrion 24.35 24.73
KRG98872 Soybean cytosol, peroxisome, plastid 24.78 24.68
Bra038561.1-P Field mustard cytosol 23.92 24.61
KRH08423 Soybean cytosol 23.71 24.61
CDY03367 Canola cytosol 23.71 24.39
KRH46098 Soybean cytosol 23.92 24.34
AT2G19070.1 Thale cress cytosol 23.49 24.17
HORVU3Hr1G097120.2 Barley cytosol, plasma membrane 23.06 24.1
KRH46095 Soybean plastid 24.57 23.95
KRG98866 Soybean cytosol 23.06 23.78
KRH46094 Soybean plastid 23.71 23.66
KRH13469 Soybean cytosol 23.28 23.53
HORVU6Hr1G012740.1 Barley peroxisome 22.2 23.52
KRG98999 Soybean mitochondrion, peroxisome, plastid 24.14 23.33
KRG98868 Soybean cytosol 21.34 22.81
HORVU6Hr1G081260.1 Barley peroxisome 23.28 22.74
KRH30198 Soybean cytosol 23.49 22.66
KRH30196 Soybean cytosol 23.49 22.66
KRH06685 Soybean plastid 22.2 22.44
KRH06686 Soybean peroxisome 22.2 22.15
HORVU6Hr1G066420.1 Barley cytosol, peroxisome, plastid 21.55 22.12
HORVU0Hr1G023570.1 Barley cytosol, peroxisome, plastid 21.55 21.98
HORVU7Hr1G030740.3 Barley cytosol 20.47 21.94
KRH70082 Soybean cytosol 12.72 21.85
KRH53324 Soybean cytosol 10.56 20.25
HORVU2Hr1G086380.1 Barley cytosol, nucleus, plastid 24.78 19.76
HORVU2Hr1G112120.3 Barley mitochondrion 9.05 16.94
Protein Annotations
EnsemblPlants:HORVU5Hr1G084980.1EnsemblPlantsGene:HORVU5Hr1G084980Gene3D:3.30.559.10GO:GO:0003674GO:GO:0003824GO:GO:0016740
GO:GO:0016747GO:GO:0050734InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:TransferasePANTHER:PTHR31642
PANTHER:PTHR31642:SF39PFAM:PF02458SEG:segUniParc:UPI000B477A43UniProt:A0A287S2W1MapMan:50.2.3
Description
No Description!
Coordinates
chrchr5H:-:573612141..573614134
Molecular Weight (calculated)
50971.5 Da
IEP (calculated)
6.554
GRAVY (calculated)
-0.190
Length
464 amino acids
Sequence
(BLAST)
001: MEVKVVSSKI VKPRYADGEL RPDTTEHVPS SVFDKITYHI QMAIIYAFQA PAPSTEDIER GLAEVLSVYR LFAGQVLAGP DGAPGVLLND HGARLVEARV
101: DGATLVEFAP PKPSPVVLQL HPDLEGDVQE VVQVQLTRFA CGSLAVGFTA NHAVADGHAT SDFLVAWGRA ARGLDISGSS PTPPPHNHAD LFLPRDPPLV
201: QFEHRGVEYY RPTLSRPRPP PLVQFEHRGV EYYRPTSNHP KQGEGGHHGA GNVLIHKAHF SKDFIAGLRA KASEGRGRPF SRFETTLAHL WRTMTRARGL
301: SPDETSTIRI SVDGRRRLSA PPGYFGNLVL WAFPRTTVGD LLSRPLKHAA QTIHDAVARL DGAYFQSLVD FASSGAVERE GLEKTAVLKD VLCPDMEVDS
401: WLTFPFYELD FGAGSPSYFM PSYFPTEGML FLVPSYLGDG SVDAFVPVFQ HNLEAFKQCC YAMD
Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.