Factsheet for Zm00001d003856_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10710	Sorghum	cytosol	88.84	86.9
Zm00001d006263_P001	Maize	cytosol	72.77	73.26
TraesCS5A01G338700.1	Wheat	cytosol	69.87	71.3
Zm00001d021329_P001	Maize	cytosol	70.09	69.93
TraesCS5B01G337100.1	Wheat	cytosol	68.75	69.84
TraesCS5B01G337000.1	Wheat	cytosol	68.75	69.84
TraesCS5D01G342700.1	Wheat	cytosol	68.53	69.61
TraesCS5D01G342800.1	Wheat	cytosol	68.08	69.48
TraesCS5A01G338600.1	Wheat	cytosol	67.63	68.71
Zm00001d006260_P001	Maize	cytosol	61.61	67.98
HORVU5Hr1G084980.1	Barley	cytosol	68.08	65.73
Zm00001d021324_P001	Maize	cytosol	61.61	62.16
Zm00001d022592_P001	Maize	cytosol	61.38	61.8
Zm00001d033521_P001	Maize	cytosol	51.79	51.1
GSMUA_Achr8P15170_001	Banana	cytosol	43.3	50.26
Solyc11g066640.1.1	Tomato	cytosol	48.66	49.66
PGSC0003DMT400018441	Potato	cytosol	48.88	49.21
PGSC0003DMT400001145	Potato	cytosol	48.21	48.98
Solyc06g074710.1.1	Tomato	cytosol	47.99	48.42
GSMUA_Achr8P03170_001	Banana	cytosol	40.4	48.14
GSMUA_Achr8P03190_001	Banana	cytosol	36.83	47.55
Solyc11g071470.1.1	Tomato	cytosol	45.98	46.5
Solyc11g071480.1.1	Tomato	cytoskeleton, cytosol, peroxisome	44.87	45.37
GSMUA_Achr8P03180_001	Banana	plastid	41.29	45.23
GSMUA_Achr8P03210_001	Banana	cytosol	34.82	44.32
GSMUA_Achr8P03200_001	Banana	cytosol	33.71	43.77
Zm00001d048870_P001	Maize	peroxisome	42.41	41.76
Zm00001d048871_P001	Maize	peroxisome	41.52	40.09
Zm00001d048872_P001	Maize	cytosol	40.85	39.61
PGSC0003DMT400048126	Potato	cytosol	39.73	39.47
Zm00001d007606_P001	Maize	peroxisome	40.62	38.97
Zm00001d027948_P001	Maize	cytosol	36.16	36.57
Zm00001d027946_P001	Maize	cytosol	35.94	36.34
PGSC0003DMT400048130	Potato	cytoskeleton, cytosol, peroxisome	45.54	35.85
Zm00001d030542_P001	Maize	plastid	35.04	35.6
Zm00001d052449_P001	Maize	cytosol, peroxisome, plastid	30.8	30.26
Zm00001d030540_P001	Maize	plastid	17.86	29.3
CDY56515	Canola	cytosol	23.21	27.37
CDY62143	Canola	cytosol	23.21	27.37
Bra024450.1-P	Field mustard	cytosol	22.99	27.11
VIT_11s0103g00200.t01	Wine grape	cytosol	27.46	26.97
KRH46097	Soybean	cytosol	13.39	26.55
Zm00001d018367_P001	Maize	cytosol	25.45	25.79
Zm00001d017186_P001	Maize	extracellular	25.67	25.78
KRH02826	Soybean	cytosol	25.89	25.49
Zm00001d020530_P001	Maize	cytosol, extracellular	24.55	25.35
Zm00001d020528_P001	Maize	cytosol	25.0	25.23
KRH46099	Soybean	cytosol, plastid	25.45	25.22
CDY66506	Canola	cytosol	24.55	24.89
VIT_11s0037g00570.t01	Wine grape	mitochondrion	24.55	24.72
Bra038561.1-P	Field mustard	cytosol	24.78	24.61
Zm00001d032148_P001	Maize	cytosol	23.66	24.59
KRG89744	Soybean	cytosol	25.45	24.57
AT2G19070.1	Thale cress	cytosol	24.55	24.39
KRH02825	Soybean	cytosol	25.0	24.35
CDY03367	Canola	cytosol	24.33	24.17
VIT_11s0037g00580.t01	Wine grape	mitochondrion	24.11	23.63
Zm00001d045091_P001	Maize	cytosol	22.77	23.56
KRH32575	Soybean	cytosol	23.44	23.44
Zm00001d037073_P001	Maize	cytosol	22.77	23.29
KRH32581	Soybean	cytosol	22.32	23.26
KRG98872	Soybean	cytosol, peroxisome, plastid	24.11	23.18
KRG98873	Soybean	mitochondrion	23.88	23.16
Zm00001d045092_P001	Maize	cytosol	22.32	22.73
KRH08423	Soybean	cytosol	22.54	22.6
KRG98999	Soybean	mitochondrion, peroxisome, plastid	23.88	22.29
KRH46095	Soybean	plastid	23.66	22.27
KRH06685	Soybean	plastid	22.77	22.22
Zm00001d039956_P001	Maize	peroxisome	21.43	22.12
KRG98867	Soybean	endoplasmic reticulum	22.32	22.08
KRG98866	Soybean	cytosol	22.1	22.0
KRH06686	Soybean	peroxisome	22.77	21.94
KRH46098	Soybean	cytosol	22.1	21.71
Zm00001d039837_P002	Maize	peroxisome	20.54	21.55
KRH46094	Soybean	plastid	22.32	21.51
KRH13469	Soybean	cytosol	21.88	21.35
Zm00001d050455_P001	Maize	plastid	22.1	20.93
Zm00001d039840_P001	Maize	peroxisome	20.31	20.82
KRH70082	Soybean	cytosol	12.5	20.74
KRG98868	Soybean	cytosol	20.09	20.74
Zm00001d041341_P001	Maize	cytosol	18.53	20.7
KRH53324	Soybean	cytosol	11.16	20.66
Zm00001d039952_P002	Maize	peroxisome	19.2	19.77
KRH30198	Soybean	cytosol	21.21	19.75
KRH30196	Soybean	cytosol	21.21	19.75
Zm00001d003129_P001	Maize	mitochondrion	6.47	19.73
Zm00001d039833_P001	Maize	cytosol	19.64	19.69
Zm00001d005607_P001	Maize	cytosol	18.97	19.36
Zm00001d039947_P002	Maize	plasma membrane	20.09	19.31
Zm00001d039951_P001	Maize	nucleus	12.05	17.59

Protein Annotations

EnsemblPlants:Zm00001d003856_P001	EnsemblPlants:Zm00001d003856_T001	EnsemblPlantsGene:Zm00001d003856	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF39	PFAM:PF02458	ProteinID:ONM17841.1	SEG:seg	UniParc:UPI00084394AF	UniProt:A0A1D6EBY9
MapMan:50.2.3	:	:	:	:	:

Description

Spermidine hydroxycinnamoyl transferase

Coordinates

chr2:-:62901361..62902707

Molecular Weight (calculated)

48959.6 Da

IEP (calculated)

6.395

GRAVY (calculated)

0.008

Length

448 amino acids

Sequence
(BLAST)

001: MEVKVMSSRL VKPSYPPGVP QPDTTQHVPC SVFDKITYHI QMAIIYAFSP PVPSIADIEH GLAAVLGVYR AFAGQVRPGP DGELGVLLND HGAQLTEAFV
101: DAHLIVVAPA RPSPELQQLH PGLHVEIEEV VQVQLTTFTC GSLVVGFTAN HAVADGRATS SFLVAWGRTM RGFPIGLPPP PLHHHPGLFP PRDPPRFEFE
201: HRGVEYRARP TPPASSSSSS HLVTAHGETT HRHDIVIHKA HFTGEFITAL RAKASEGRGH PFSRFETIVG HVWRAMTRAR GLRDPCQASA IRISVDGRPR
301: LGVPQEYFGN LVLWAFPRTT VGNLLTQSLT HAAQVIHDAV KQVDRAYFQS FLDFASSGVV EEEGLETTAV LSSDVLCPDL DVDSWLTFPF QELDLGTGGP
401: SYFMPPYIPI EGMFFLVPSC LGDGSVDAFV PVFKHTLEAF MQCCCSVE

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.