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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039840_P001 Maize peroxisome 82.44 80.55
KXG31858 Sorghum peroxisome 77.28 76.39
Zm00001d039833_P001 Maize cytosol 79.86 76.29
Zm00001d039956_P001 Maize peroxisome 69.09 67.97
Zm00001d039952_P002 Maize peroxisome 66.98 65.75
Zm00001d039947_P002 Maize plasma membrane 68.38 62.66
Zm00001d039951_P001 Maize nucleus 40.05 55.7
Os08t0543400-02 Rice cytosol, plasma membrane 56.21 54.3
Os11t0182200-01 Rice cytosol 56.44 53.91
TraesCS6B01G288300.1 Wheat peroxisome 53.16 51.95
Zm00001d005607_P001 Maize cytosol 53.4 51.94
TraesCS6A01G260900.1 Wheat peroxisome 52.93 51.6
TraesCS6D01G241700.1 Wheat cytosol 52.69 51.37
HORVU6Hr1G066420.1 Barley cytosol, peroxisome, plastid 53.63 50.66
HORVU0Hr1G023570.1 Barley cytosol, peroxisome, plastid 53.63 50.33
Os08t0205000-00 Rice cytosol 19.67 50.3
TraesCS2A01G040800.1 Wheat cytosol 52.22 49.34
HORVU2Hr1G112120.3 Barley mitochondrion 26.23 45.16
Zm00001d032148_P001 Maize cytosol 44.03 43.62
Zm00001d020530_P001 Maize cytosol, extracellular 43.09 42.4
Zm00001d003129_P001 Maize mitochondrion 13.82 40.14
Zm00001d018367_P001 Maize cytosol 41.22 39.82
TraesCS2A01G040600.1 Wheat cytosol 40.28 39.0
Zm00001d050455_P001 Maize plastid 42.86 38.69
Zm00001d020528_P001 Maize cytosol 38.88 37.39
Zm00001d045092_P001 Maize cytosol 38.41 37.27
Zm00001d041341_P001 Maize cytosol 34.43 36.66
Zm00001d037073_P001 Maize cytosol 37.24 36.3
Zm00001d045091_P001 Maize cytosol 36.3 35.8
Zm00001d017186_P001 Maize extracellular 36.77 35.2
Zm00001d033521_P001 Maize cytosol 27.17 25.55
Zm00001d021324_P001 Maize cytosol 24.59 23.65
Zm00001d007606_P001 Maize peroxisome 25.76 23.55
Zm00001d048870_P001 Maize peroxisome 25.06 23.52
Zm00001d052449_P001 Maize cytosol, peroxisome, plastid 25.06 23.46
Zm00001d021329_P001 Maize cytosol 24.59 23.39
Zm00001d006263_P001 Maize cytosol 23.65 22.7
Zm00001d027946_P001 Maize cytosol 23.18 22.35
Zm00001d048872_P001 Maize cytosol 24.12 22.29
Zm00001d022592_P001 Maize cytosol 23.18 22.25
Zm00001d027948_P001 Maize cytosol 22.95 22.12
Zm00001d006260_P001 Maize cytosol 20.61 21.67
Zm00001d048871_P001 Maize peroxisome 22.95 21.12
Zm00001d003856_P001 Maize cytosol 21.55 20.54
Zm00001d030542_P001 Maize plastid 21.08 20.41
Zm00001d030540_P001 Maize plastid 10.3 16.12
Protein Annotations
EntrezGene:100279982Gene3D:3.30.559.10MapMan:50.2.3UniProt:B4FRQ8EMBL:BT039796EMBL:BT040548
EMBL:BT055253EMBL:BT070176InterPro:CAT-like_dom_sfncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0016740GO:GO:0016747InterPro:IPR023213ProteinID:ONM29988.1ProteinID:ONM29989.1ProteinID:ONM29990.1
ProteinID:ONM29991.1ProteinID:ONM29992.1PFAM:PF02458PANTHER:PTHR31642PANTHER:PTHR31642:SF16InterPro:Transferase
UniParc:UPI00017B77B4EnsemblPlantsGene:Zm00001d039837EnsemblPlants:Zm00001d039837_P002EnsemblPlants:Zm00001d039837_T002SEG:seg:
Description
Spermidine hydroxycinnamoyl transferase
Coordinates
chr3:-:16287892..16290192
Molecular Weight (calculated)
46572.1 Da
IEP (calculated)
7.742
GRAVY (calculated)
-0.037
Length
427 amino acids
Sequence
(BLAST)
001: MDYLKVQVVE SSFVVPSEPT PTKALWLSCL DMVQSNKAHT PTIHLYSSND AAAADFFDLG RLKKATAKAL VAFYPLAGRL VDSDDGRKEI SCNGEGALFV
101: VARADGDLTI DEVKKFKPSP ELRRLFIPLI EPSSIIMAIQ VTFLKCGGVV LGTAIHHAAT DVSSAFHFFQ TWSAFCKHGD SAAVELPCHD RTLLRARSPP
201: TVHPDALSTL QPRLVLTEPE GPLAIEIFTI SRDHVASLKQ LCGGTSTFCA VSALIWQCAC VARRIPPDSQ VRVMFPADVR RRMRPPLPTH YFGNAVIRLY
301: AAGPAGDIGT AALASVAARI KGAVERMDDE LVRSAIDYYE MAETNKRRTG TGILPRTDLN ITSWLGRPQH DADFGWGKPQ SMSRAESVRG GSMHLMNDDG
401: GTGDVRVLVC LEAENIKELG RLLYAKL
Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.