Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d039840_P001 | Maize | peroxisome | 82.44 | 80.55 |
KXG31858 | Sorghum | peroxisome | 77.28 | 76.39 |
Zm00001d039833_P001 | Maize | cytosol | 79.86 | 76.29 |
Zm00001d039956_P001 | Maize | peroxisome | 69.09 | 67.97 |
Zm00001d039952_P002 | Maize | peroxisome | 66.98 | 65.75 |
Zm00001d039947_P002 | Maize | plasma membrane | 68.38 | 62.66 |
Zm00001d039951_P001 | Maize | nucleus | 40.05 | 55.7 |
Os08t0543400-02 | Rice | cytosol, plasma membrane | 56.21 | 54.3 |
Os11t0182200-01 | Rice | cytosol | 56.44 | 53.91 |
TraesCS6B01G288300.1 | Wheat | peroxisome | 53.16 | 51.95 |
Zm00001d005607_P001 | Maize | cytosol | 53.4 | 51.94 |
TraesCS6A01G260900.1 | Wheat | peroxisome | 52.93 | 51.6 |
TraesCS6D01G241700.1 | Wheat | cytosol | 52.69 | 51.37 |
HORVU6Hr1G066420.1 | Barley | cytosol, peroxisome, plastid | 53.63 | 50.66 |
HORVU0Hr1G023570.1 | Barley | cytosol, peroxisome, plastid | 53.63 | 50.33 |
Os08t0205000-00 | Rice | cytosol | 19.67 | 50.3 |
TraesCS2A01G040800.1 | Wheat | cytosol | 52.22 | 49.34 |
HORVU2Hr1G112120.3 | Barley | mitochondrion | 26.23 | 45.16 |
Zm00001d032148_P001 | Maize | cytosol | 44.03 | 43.62 |
Zm00001d020530_P001 | Maize | cytosol, extracellular | 43.09 | 42.4 |
Zm00001d003129_P001 | Maize | mitochondrion | 13.82 | 40.14 |
Zm00001d018367_P001 | Maize | cytosol | 41.22 | 39.82 |
TraesCS2A01G040600.1 | Wheat | cytosol | 40.28 | 39.0 |
Zm00001d050455_P001 | Maize | plastid | 42.86 | 38.69 |
Zm00001d020528_P001 | Maize | cytosol | 38.88 | 37.39 |
Zm00001d045092_P001 | Maize | cytosol | 38.41 | 37.27 |
Zm00001d041341_P001 | Maize | cytosol | 34.43 | 36.66 |
Zm00001d037073_P001 | Maize | cytosol | 37.24 | 36.3 |
Zm00001d045091_P001 | Maize | cytosol | 36.3 | 35.8 |
Zm00001d017186_P001 | Maize | extracellular | 36.77 | 35.2 |
Zm00001d033521_P001 | Maize | cytosol | 27.17 | 25.55 |
Zm00001d021324_P001 | Maize | cytosol | 24.59 | 23.65 |
Zm00001d007606_P001 | Maize | peroxisome | 25.76 | 23.55 |
Zm00001d048870_P001 | Maize | peroxisome | 25.06 | 23.52 |
Zm00001d052449_P001 | Maize | cytosol, peroxisome, plastid | 25.06 | 23.46 |
Zm00001d021329_P001 | Maize | cytosol | 24.59 | 23.39 |
Zm00001d006263_P001 | Maize | cytosol | 23.65 | 22.7 |
Zm00001d027946_P001 | Maize | cytosol | 23.18 | 22.35 |
Zm00001d048872_P001 | Maize | cytosol | 24.12 | 22.29 |
Zm00001d022592_P001 | Maize | cytosol | 23.18 | 22.25 |
Zm00001d027948_P001 | Maize | cytosol | 22.95 | 22.12 |
Zm00001d006260_P001 | Maize | cytosol | 20.61 | 21.67 |
Zm00001d048871_P001 | Maize | peroxisome | 22.95 | 21.12 |
Zm00001d003856_P001 | Maize | cytosol | 21.55 | 20.54 |
Zm00001d030542_P001 | Maize | plastid | 21.08 | 20.41 |
Zm00001d030540_P001 | Maize | plastid | 10.3 | 16.12 |
Protein Annotations
EntrezGene:100279982 | Gene3D:3.30.559.10 | MapMan:50.2.3 | UniProt:B4FRQ8 | EMBL:BT039796 | EMBL:BT040548 |
EMBL:BT055253 | EMBL:BT070176 | InterPro:CAT-like_dom_sf | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR023213 | ProteinID:ONM29988.1 | ProteinID:ONM29989.1 | ProteinID:ONM29990.1 |
ProteinID:ONM29991.1 | ProteinID:ONM29992.1 | PFAM:PF02458 | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 | InterPro:Transferase |
UniParc:UPI00017B77B4 | EnsemblPlantsGene:Zm00001d039837 | EnsemblPlants:Zm00001d039837_P002 | EnsemblPlants:Zm00001d039837_T002 | SEG:seg | : |
Description
Spermidine hydroxycinnamoyl transferase
Coordinates
chr3:-:16287892..16290192
Molecular Weight (calculated)
46572.1 Da
IEP (calculated)
7.742
GRAVY (calculated)
-0.037
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYLKVQVVE SSFVVPSEPT PTKALWLSCL DMVQSNKAHT PTIHLYSSND AAAADFFDLG RLKKATAKAL VAFYPLAGRL VDSDDGRKEI SCNGEGALFV
101: VARADGDLTI DEVKKFKPSP ELRRLFIPLI EPSSIIMAIQ VTFLKCGGVV LGTAIHHAAT DVSSAFHFFQ TWSAFCKHGD SAAVELPCHD RTLLRARSPP
201: TVHPDALSTL QPRLVLTEPE GPLAIEIFTI SRDHVASLKQ LCGGTSTFCA VSALIWQCAC VARRIPPDSQ VRVMFPADVR RRMRPPLPTH YFGNAVIRLY
301: AAGPAGDIGT AALASVAARI KGAVERMDDE LVRSAIDYYE MAETNKRRTG TGILPRTDLN ITSWLGRPQH DADFGWGKPQ SMSRAESVRG GSMHLMNDDG
401: GTGDVRVLVC LEAENIKELG RLLYAKL
101: VARADGDLTI DEVKKFKPSP ELRRLFIPLI EPSSIIMAIQ VTFLKCGGVV LGTAIHHAAT DVSSAFHFFQ TWSAFCKHGD SAAVELPCHD RTLLRARSPP
201: TVHPDALSTL QPRLVLTEPE GPLAIEIFTI SRDHVASLKQ LCGGTSTFCA VSALIWQCAC VARRIPPDSQ VRVMFPADVR RRMRPPLPTH YFGNAVIRLY
301: AAGPAGDIGT AALASVAARI KGAVERMDDE LVRSAIDYYE MAETNKRRTG TGILPRTDLN ITSWLGRPQH DADFGWGKPQ SMSRAESVRG GSMHLMNDDG
401: GTGDVRVLVC LEAENIKELG RLLYAKL
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.