CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 4
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039833_P001	Maize	cytosol	81.02	78.3
Zm00001d039837_P002	Maize	peroxisome	76.39	77.28
Zm00001d039840_P001	Maize	peroxisome	78.01	77.12
KXG31859	Sorghum	peroxisome	77.55	76.66
KXG31861	Sorghum	cytosol, peroxisome, plastid	76.62	75.23
KXG31860	Sorghum	cytosol, peroxisome, plastid	75.0	74.31
OQU75613	Sorghum	cytosol, peroxisome, plastid	75.0	74.31
EES02456	Sorghum	cytosol, peroxisome, plastid	75.46	71.96
KXG31953	Sorghum	cytosol, endoplasmic reticulum, peroxisome	71.76	71.43
EES02467	Sorghum	cytosol, peroxisome, plastid	71.3	68.9
KXG31863	Sorghum	plastid	58.8	67.91
KXG31952	Sorghum	cytosol	61.34	63.86
EER96600	Sorghum	peroxisome	58.1	57.7
OQU86302	Sorghum	mitochondrion	32.64	57.55
Os08t0543400-02	Rice	cytosol, plasma membrane	57.41	56.11
TraesCS6B01G288300.1	Wheat	peroxisome	53.47	52.86
TraesCS6D01G241700.1	Wheat	cytosol	52.78	52.05
TraesCS6A01G260900.1	Wheat	peroxisome	52.55	51.83
HORVU6Hr1G066420.1	Barley	cytosol, peroxisome, plastid	53.01	50.66
Os11t0182200-01	Rice	cytosol	52.31	50.56
TraesCS2A01G040800.1	Wheat	cytosol	52.78	50.44
HORVU0Hr1G023570.1	Barley	cytosol, peroxisome, plastid	53.01	50.33
HORVU2Hr1G112120.3	Barley	mitochondrion	26.39	45.97
Os08t0205000-00	Rice	cytosol	17.13	44.31
EER98920	Sorghum	cytosol	43.52	43.42
EES15064	Sorghum	cytosol	42.82	41.76
TraesCS2A01G040600.1	Wheat	cytosol	40.51	39.68
EES15065	Sorghum	cytosol, peroxisome, plastid	40.28	39.01
EER98918	Sorghum	cytosol, peroxisome, plastid	39.58	37.75
EES07672	Sorghum	cytosol	39.12	37.47
EER87979	Sorghum	cytosol	37.27	37.01
KXG19490	Sorghum	cytosol	37.27	37.01
EER89344	Sorghum	cytosol	36.81	36.38
EES11073	Sorghum	mitochondrion	35.42	34.69
EES05411	Sorghum	cytosol	35.42	34.15
OQU91195	Sorghum	cytosol	27.55	25.98
OQU89853	Sorghum	cytosol	24.54	23.93
OQU83825	Sorghum	peroxisome, plastid	23.61	23.02
EES09214	Sorghum	cytosol, peroxisome, plastid	23.15	22.08
EES10710	Sorghum	cytosol	22.22	20.96
EER88164	Sorghum	cytosol	15.51	19.31

Protein Annotations

EnsemblPlants:KXG31858	EnsemblPlantsGene:SORBI_3003G068600	EntrezGene:8060773	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF16	PFAM:PF02458	ProteinID:KXG31858	ProteinID:KXG31858.2	RefSeq:XP_002457339.1	SEG:seg
UniParc:UPI0001A851A8	UniProt:A0A1B6Q1P9	MapMan:50.2.3	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:5805871..5807518

Molecular Weight (calculated)

47533.3 Da

IEP (calculated)

6.694

GRAVY (calculated)

-0.006

Length

432 amino acids

Sequence
(BLAST)

001: MDFKVQVVES SFVTPTEPAP RKGLWLSSLD LVQANKGHTP TIYLYSSNDV GAADFFNVAR LKEAMARALV AFYPLAGRLG VSNDDGRMEI SCNGEGALFV
101: IAHADDLSIE DVKEFKPSPE LRRLFVPRIE PSSIILAIQV TFLKCGGVAL GTALHHVAID ASSAFHFFQT WAAFSKHGDR AAVEFPCHDR TLLRARSPPT
201: VHPDALLTLH PKLIFSNPEG PLAFEVFTIS RDQVASLKHL CCGMSTFCTL SALIWQCTCV VRQLPPESEV RIVFPADLRR RMRPPLPDHY FGNAVFRLCA
301: TGAAGEIGTV ALGSVAARIK GAIERMDDEL VRSAIDYFEM AEMDKRPALR GTLPPTDMHI TSWFGRPQYD ADFGWGKPQF MSRAESVRGG YVHLMNDEGT
401: TDDGGGSGDV RMLVCMEAVN IKELGRLLYA KL

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.