CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050455_P001	Maize	plastid	89.69	84.57
EES15064	Sorghum	cytosol	71.3	71.78
TraesCS7D01G524200.1	Wheat	cytosol	67.94	69.5
HORVU7Hr1G118090.1	Barley	cytosol	67.94	69.18
TraesCS7B01G455100.1	Wheat	cytosol	66.82	68.98
TraesCS7A01G537300.1	Wheat	cytosol	67.04	68.74
EER98920	Sorghum	cytosol	60.76	62.59
KXG31953	Sorghum	cytosol, endoplasmic reticulum, peroxisome	44.39	45.62
EER98918	Sorghum	cytosol, peroxisome, plastid	43.27	42.6
EER96600	Sorghum	peroxisome	40.36	41.38
KXG31859	Sorghum	peroxisome	39.69	40.5
EES07672	Sorghum	cytosol	40.81	40.35
KXG31858	Sorghum	peroxisome	39.01	40.28
KXG31952	Sorghum	cytosol	37.44	40.24
OQU75613	Sorghum	cytosol, peroxisome, plastid	39.01	39.91
KXG31860	Sorghum	cytosol, peroxisome, plastid	39.01	39.91
KXG31861	Sorghum	cytosol, peroxisome, plastid	39.01	39.55
EER89344	Sorghum	cytosol	38.12	38.9
KXG19490	Sorghum	cytosol	37.89	38.85
EER87979	Sorghum	cytosol	37.89	38.85
EES02456	Sorghum	cytosol, peroxisome, plastid	38.79	38.19
EES02467	Sorghum	cytosol, peroxisome, plastid	37.89	37.81
OQU86302	Sorghum	mitochondrion	20.18	36.73
EES11073	Sorghum	mitochondrion	36.1	36.51
EES05411	Sorghum	cytosol	36.32	36.16
KXG31863	Sorghum	plastid	29.15	34.76
OQU91195	Sorghum	cytosol	28.92	28.17
OQU89853	Sorghum	cytosol	23.09	23.25
OQU83825	Sorghum	peroxisome, plastid	22.87	23.02
EES10710	Sorghum	cytosol	22.65	22.05
EES09214	Sorghum	cytosol, peroxisome, plastid	21.97	21.63
EER88164	Sorghum	cytosol	15.92	20.46

Protein Annotations

EnsemblPlants:EES15065	EnsemblPlantsGene:SORBI_3007G142200	EntrezGene:8080611	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF25	PFAM:PF02458	ProteinID:EES15065	ProteinID:EES15065.1	RefSeq:XP_002445570.1	SEG:seg
SUPFAM:SSF52777	unigene:Sbi.20858	UniParc:UPI0001A87BF2	UniProt:C5YLM4	MapMan:50.2.3	:

Description

hypothetical protein

Coordinates

chr7:-:57211035..57212871

Molecular Weight (calculated)

47507.8 Da

IEP (calculated)

6.165

GRAVY (calculated)

0.091

Length

446 amino acids

Sequence
(BLAST)

001: MTKQVVVVDT ALVAPSEETP RQPLWLSNLD LAVPRTHTPL VYYYPAPAQG GAALGTGSFA PDRLRAALAV ALVPFYPLAG RLGVGPDGRL QIECNSNGAL
101: FVVANADLTG ADVFDDYEPS AEVRNTFVPV ADSGDATSSP MAMFQVTFLK CGGVVLGTAI HHAAMDGVGA FQFMQTWSGV ARGLQVAEAC GPQAPFHDRT
201: LLRARCPPCP TSDHFVYSPG FLSGRPRAYV TRVYAVSPKL LADVKSRCAP GVSTYCALTA HLWRCVCVAR GLAPGADTLL GLPANVRHRL RPPLPRTFFG
301: NAVVRDLVTA PVSTVLDSSL GSVAETIKKA VDRVDDAFAR SVLDYLELQQ NNAGGGGQQA QAAQAPSREQ LVPATDLWAV SWLGMAMYDA DFGTGAPRFV
401: APAQMFGVGT AYMTPRGPDR DDGIAVLISL EPEYLPSFEK VFFYNE

Best Arabidopsis Sequence Match ( AT5G57840.1 )
(BLAST)

001: MKIRVKQATI VKPAEETPTH NLWLSNLDLI QVRLHMGTLY FYKPCSSSDR PNTQSLIEAL SKVLVFFYPA AGRLQKNTNG RLEVQCNGEG VLFVEAESDS
101: TVQDIGLLTQ SLDLSQLVPT VDYAGDISSY PLLLFQVTYF KCGTICVGSS IHHTFGEATS LGYIMEAWSL TARGLLVKLT PFLDRTVLHA RNPPSSVFPH
201: TEYQSPPFHN HPMKSLAYRS NPESDSAIAT LKLTRLQLKA LKARAEIADS KFSTYEVLVA HTWRCASFAN EDLSEEHSTR LHIIIDGRPR LQPKLPQGYI
301: GNTLFHARPV SPLGAFHRES FSETVERVHR EIRKMDNEYL RSAIDYLERH PDLDQLVPGE GNTIFSCAAN FCIVSLIKQT AYEMDFGWGK AYYKRASHLN
401: EGKGFVTGNP DEEGSMMLTM CLKKTQLSKF RKLFYEFLNV SAL

Arabidopsis Description

AT5g57840/MTI20_9 [Source:UniProtKB/TrEMBL;Acc:Q9FJN0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.