Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037073_P001 | Maize | cytosol | 93.14 | 92.92 |
| Zm00001d045091_P001 | Maize | cytosol | 89.02 | 89.84 |
| TraesCS7A01G150200.1 | Wheat | cytosol | 78.95 | 80.42 |
| TraesCS7D01G151900.1 | Wheat | cytosol | 78.72 | 80.19 |
| HORVU7Hr1G030780.1 | Barley | cytosol | 78.72 | 80.0 |
| TraesCS7B01G054100.1 | Wheat | cytosol | 78.49 | 79.95 |
| KXG19490 | Sorghum | cytosol | 77.12 | 77.47 |
| EER87979 | Sorghum | cytosol | 77.12 | 77.47 |
| TraesCS3D01G314900.1 | Wheat | peroxisome | 76.43 | 75.74 |
| TraesCS3B01G350400.1 | Wheat | peroxisome | 74.83 | 74.15 |
| EER98918 | Sorghum | cytosol, peroxisome, plastid | 55.38 | 53.42 |
| EES07672 | Sorghum | cytosol | 43.48 | 42.13 |
| KXG31953 | Sorghum | cytosol, endoplasmic reticulum, peroxisome | 40.5 | 40.78 |
| EER98920 | Sorghum | cytosol | 40.27 | 40.65 |
| EES15064 | Sorghum | cytosol | 40.27 | 39.73 |
| EER96600 | Sorghum | peroxisome | 37.99 | 38.16 |
| EES15065 | Sorghum | cytosol, peroxisome, plastid | 38.9 | 38.12 |
| EES11073 | Sorghum | mitochondrion | 37.99 | 37.64 |
| KXG31859 | Sorghum | peroxisome | 37.07 | 37.07 |
| KXG31952 | Sorghum | cytosol | 35.01 | 36.87 |
| EES05411 | Sorghum | cytosol | 37.76 | 36.83 |
| KXG31858 | Sorghum | peroxisome | 36.38 | 36.81 |
| EES02456 | Sorghum | cytosol, peroxisome, plastid | 37.76 | 36.42 |
| KXG31861 | Sorghum | cytosol, peroxisome, plastid | 36.61 | 36.36 |
| KXG31860 | Sorghum | cytosol, peroxisome, plastid | 36.16 | 36.24 |
| OQU75613 | Sorghum | cytosol, peroxisome, plastid | 36.16 | 36.24 |
| EES02467 | Sorghum | cytosol, peroxisome, plastid | 34.1 | 33.33 |
| KXG31863 | Sorghum | plastid | 27.92 | 32.62 |
| OQU86302 | Sorghum | mitochondrion | 16.93 | 30.2 |
| OQU91195 | Sorghum | cytosol | 27.92 | 26.64 |
| OQU89853 | Sorghum | cytosol | 25.63 | 25.28 |
| OQU83825 | Sorghum | peroxisome, plastid | 25.4 | 25.06 |
| EES10710 | Sorghum | cytosol | 24.26 | 23.14 |
| EES09214 | Sorghum | cytosol, peroxisome, plastid | 23.34 | 22.52 |
| EER88164 | Sorghum | cytosol | 15.33 | 19.31 |
Protein Annotations
| EnsemblPlants:EER89344 | EnsemblPlantsGene:SORBI_3010G066800 | EntrezGene:8076209 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016740 | GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 |
| PANTHER:PTHR31642:SF111 | PFAM:PF02458 | ProteinID:EER89344 | ProteinID:EER89344.1 | RefSeq:XP_002437977.1 | SEG:seg |
| SUPFAM:SSF52777 | unigene:Sbi.9169 | UniParc:UPI0001A89738 | UniProt:C5Z5T8 | MapMan:50.2.3 | : |
Description
hypothetical protein
Coordinates
chr10:-:5346363..5348561
Molecular Weight (calculated)
46431.9 Da
IEP (calculated)
5.466
GRAVY (calculated)
0.214
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTVEVLTS EVVVPAEETP AGSIWLSNLD LAARRGYTPT VYFFRPNGDP GFFAADVVKG SLARALVPFY PLAGRLGADG ATGRVQVDCT GEGAVFVTAR
101: CDYALDDLMR EFVPCRAMRD LLVPPTPAPN PPCALLFVQV TYLRCGGVVL ALSMHHSLCD ARGAAHFLET WASIARGDDA AANAPVPPCF GYGLLAARPG
201: PARAVLYDHP EYKPEPVLDA VAAAASDDDY ASAIIVMTKA QVGALRARCP GASTFRAVVA LVWQCVCRAR ALPPGAETRL YSMIDMRSRL DPPLPPGYFG
301: NAVVRTSVSA TAGEVVGNPV GYAARRALAA TSQGDDYARS LVDYLEGVDA MNLPRSGISR AHLRAISWVG MSLYKADFGW GAPAFMGPAL MYYSGFVYVM
401: NAAGKEGALA LVLSLEPETM PEFRKVFAEE LAGLEVL
101: CDYALDDLMR EFVPCRAMRD LLVPPTPAPN PPCALLFVQV TYLRCGGVVL ALSMHHSLCD ARGAAHFLET WASIARGDDA AANAPVPPCF GYGLLAARPG
201: PARAVLYDHP EYKPEPVLDA VAAAASDDDY ASAIIVMTKA QVGALRARCP GASTFRAVVA LVWQCVCRAR ALPPGAETRL YSMIDMRSRL DPPLPPGYFG
301: NAVVRTSVSA TAGEVVGNPV GYAARRALAA TSQGDDYARS LVDYLEGVDA MNLPRSGISR AHLRAISWVG MSLYKADFGW GAPAFMGPAL MYYSGFVYVM
401: NAAGKEGALA LVLSLEPETM PEFRKVFAEE LAGLEVL
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.