Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31858 | Sorghum | peroxisome | 68.9 | 71.3 |
| KXG31859 | Sorghum | peroxisome | 68.23 | 69.79 |
| KXG31861 | Sorghum | cytosol, peroxisome, plastid | 65.77 | 66.82 |
| OQU75613 | Sorghum | cytosol, peroxisome, plastid | 64.88 | 66.51 |
| KXG31860 | Sorghum | cytosol, peroxisome, plastid | 64.88 | 66.51 |
| EES02456 | Sorghum | cytosol, peroxisome, plastid | 66.67 | 65.78 |
| KXG31953 | Sorghum | cytosol, endoplasmic reticulum, peroxisome | 63.53 | 65.44 |
| KXG31863 | Sorghum | plastid | 53.69 | 64.17 |
| KXG31952 | Sorghum | cytosol | 55.48 | 59.76 |
| EER96600 | Sorghum | peroxisome | 52.13 | 53.56 |
| Os08t0543400-02 | Rice | cytosol, plasma membrane | 51.23 | 51.81 |
| OQU86302 | Sorghum | mitochondrion | 28.19 | 51.43 |
| TraesCS6D01G241700.1 | Wheat | cytosol | 47.87 | 48.86 |
| TraesCS6A01G260900.1 | Wheat | peroxisome | 47.87 | 48.86 |
| TraesCS6B01G288300.1 | Wheat | peroxisome | 47.2 | 48.28 |
| Os11t0182200-01 | Rice | cytosol | 48.1 | 48.1 |
| HORVU6Hr1G066420.1 | Barley | cytosol, peroxisome, plastid | 47.43 | 46.9 |
| HORVU0Hr1G023570.1 | Barley | cytosol, peroxisome, plastid | 47.43 | 46.59 |
| Os08t0205000-00 | Rice | cytosol | 17.0 | 45.51 |
| TraesCS2A01G040800.1 | Wheat | cytosol | 44.97 | 44.47 |
| HORVU2Hr1G112120.3 | Barley | mitochondrion | 23.04 | 41.53 |
| EER98920 | Sorghum | cytosol | 39.15 | 40.42 |
| EES15064 | Sorghum | cytosol | 38.7 | 39.05 |
| EES15065 | Sorghum | cytosol, peroxisome, plastid | 37.81 | 37.89 |
| EES07672 | Sorghum | cytosol | 36.02 | 35.7 |
| EER98918 | Sorghum | cytosol, peroxisome, plastid | 35.12 | 34.66 |
| EER87979 | Sorghum | cytosol | 33.56 | 34.48 |
| KXG19490 | Sorghum | cytosol | 33.56 | 34.48 |
| EER89344 | Sorghum | cytosol | 33.33 | 34.1 |
| TraesCS2A01G040600.1 | Wheat | cytosol | 33.33 | 33.79 |
| EES05411 | Sorghum | cytosol | 32.21 | 32.14 |
| EES11073 | Sorghum | mitochondrion | 31.32 | 31.75 |
| OQU91195 | Sorghum | cytosol | 25.06 | 24.45 |
| OQU83825 | Sorghum | peroxisome, plastid | 22.37 | 22.57 |
| EES09214 | Sorghum | cytosol, peroxisome, plastid | 21.03 | 20.75 |
| OQU89853 | Sorghum | cytosol | 20.36 | 20.54 |
| EES10710 | Sorghum | cytosol | 19.02 | 18.56 |
| EER88164 | Sorghum | cytosol | 14.32 | 18.44 |
Protein Annotations
| EnsemblPlants:EES02467 | EnsemblPlantsGene:SORBI_3003G069300 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | ProteinID:EES02467 | ProteinID:EES02467.2 | RefSeq:XP_002457347.1 | SEG:seg | UniParc:UPI0009DC9367 |
| UniProt:C5XPX8 | MapMan:50.2.3 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:5916237..5925440
Molecular Weight (calculated)
48943.3 Da
IEP (calculated)
7.393
GRAVY (calculated)
0.045
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAKVQVLES SFIAPSEPTP RKELWLSSLD LEFRVSTVVG GRSRSGDVHG VGVGHVPIIY LYHHNSSSDG AMADFFNVAR LKEAMAKALV AFYPLAGRLG
101: VSSDGRMEIT CNDEDALFVV ARAPDLTTDE VKAFKPSPEL RNLLVPRIEP SSSSIIMAIQ VTFLKCGGVA LGTALHHISS DASSAFHFFQ TWSAFSTHGD
201: HAVMELPCHD LHPDALLTLH PKLIFSNPSG PLATKVFTIS RAQIASLKHR CGGMMSTFCV VSALVWQCTC IARRLVPDSK VCLSFPIDLR RRMRPPLPNH
301: YFGNAVFRLD VTSTARDIAK EALGSIAGRI KGVIDRMDEE LVRSAIDYFE MAQIGSRPPK GTLPQTDLYI VSWFGRPHYD ADFGWGKPQL MSLAEHGSGG
401: CVCLMNNEGT THDVGGSSDI RVVMCMEAVN MKELQWLLGC LVPRTKL
101: VSSDGRMEIT CNDEDALFVV ARAPDLTTDE VKAFKPSPEL RNLLVPRIEP SSSSIIMAIQ VTFLKCGGVA LGTALHHISS DASSAFHFFQ TWSAFSTHGD
201: HAVMELPCHD LHPDALLTLH PKLIFSNPSG PLATKVFTIS RAQIASLKHR CGGMMSTFCV VSALVWQCTC IARRLVPDSK VCLSFPIDLR RRMRPPLPNH
301: YFGNAVFRLD VTSTARDIAK EALGSIAGRI KGVIDRMDEE LVRSAIDYFE MAQIGSRPPK GTLPQTDLYI VSWFGRPHYD ADFGWGKPQL MSLAEHGSGG
401: CVCLMNNEGT THDVGGSSDI RVVMCMEAVN MKELQWLLGC LVPRTKL
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.