CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020528_P001	Maize	cytosol	83.66	85.36
TraesCS5B01G222000.1	Wheat	plastid	77.7	80.37
TraesCS5D01G230700.1	Wheat	plastid	77.04	79.68
HORVU5Hr1G064280.1	Barley	plastid	75.94	78.54
TraesCS5A01G222900.1	Wheat	cytosol	52.1	73.75
EER89344	Sorghum	cytosol	53.42	55.38
EER87979	Sorghum	cytosol	50.77	52.87
KXG19490	Sorghum	cytosol	50.77	52.87
EES07672	Sorghum	cytosol	46.36	46.56
EER98920	Sorghum	cytosol	42.83	44.8
EES15064	Sorghum	cytosol	43.27	44.24
EES15065	Sorghum	cytosol, peroxisome, plastid	42.6	43.27
KXG31953	Sorghum	cytosol, endoplasmic reticulum, peroxisome	40.84	42.63
EES05411	Sorghum	cytosol	40.18	40.62
EES11073	Sorghum	mitochondrion	39.07	40.14
KXG31861	Sorghum	cytosol, peroxisome, plastid	38.63	39.77
KXG31859	Sorghum	peroxisome	38.19	39.59
KXG31858	Sorghum	peroxisome	37.75	39.58
KXG31860	Sorghum	cytosol, peroxisome, plastid	37.53	38.99
OQU75613	Sorghum	cytosol, peroxisome, plastid	37.53	38.99
KXG31952	Sorghum	cytosol	35.1	38.31
EES02456	Sorghum	cytosol, peroxisome, plastid	38.19	38.19
EER96600	Sorghum	peroxisome	36.64	38.16
EES02467	Sorghum	cytosol, peroxisome, plastid	34.66	35.12
KXG31863	Sorghum	plastid	28.92	35.03
OQU86302	Sorghum	mitochondrion	16.78	31.02
OQU91195	Sorghum	cytosol	28.48	28.17
OQU89853	Sorghum	cytosol	26.71	27.31
EES10710	Sorghum	cytosol	26.71	26.42
OQU83825	Sorghum	peroxisome, plastid	25.61	26.19
EES09214	Sorghum	cytosol, peroxisome, plastid	24.28	24.28
EER88164	Sorghum	cytosol	15.67	20.46

Protein Annotations

EnsemblPlants:EER98918	EnsemblPlantsGene:SORBI_3002G205100	EntrezGene:8060265	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF23	PFAM:PF02458	ProteinID:EER98918	ProteinID:EER98918.1	RefSeq:XP_002462397.1	SEG:seg
UniParc:UPI0001A8403A	UniProt:C5XCX0	MapMan:50.2.3	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:59647983..59650426

Molecular Weight (calculated)

48419.5 Da

IEP (calculated)

6.077

GRAVY (calculated)

-0.006

Length

453 amino acids

Sequence
(BLAST)

001: MAVEVVTSEL VAPSETTPRR ALWLSNLDLA ARNGYTPTVY FFRRRCPQPQ DGSGGDDDDR APQQPSPDFF SADVLRAALA AALVQFYPFA GRLRAGRDDD
101: GRAEIDCNAA GALFVVARSA AALEDFDGFA PSKAMNDTFV PKYDSTAGPD APLLLLQVTF FRCGGVTLGT AMHPFVIDGR SAFHFIRTWA SIARGDTAAA
201: AVPPSLDRTP LRARPLPTVL FDHTYEYGGR TSRPPTTGGN NKAAEYASAI LRVTGAQAAA LRARAGAVST FRALVAHVWR CACAARALAP DAESRLYTMV
301: DMRARLSPPL PDAFFGNAVA RTSVSAVVGD LLANPLGFGA RRLRAATGHG DEYARSLLDY LETADLAALP RGGLAGTDLR VISWLGMPSY DADFGWGEPA
401: LLAPALMYYP GFVYLLNCPG NGKGGGVAVA VALEPERMER FKELFFEELA ALE

Best Arabidopsis Sequence Match ( AT1G65450.1 )
(BLAST)

001: MGSSYQESPP LLLEDLKVTI KESTLIFPSE ETSERKSMFL SNVDQILNFD VQTVHFFRPN KEFPPEMVSE KLRKALVKLM DAYEFLAGRL RVDPSSGRLD
101: VDCNGAGAGF VTAASDYTLE ELGDLVYPNP AFAQLVTSQL QSLPKDDQPL FVFQITSFKC GGFAMGISTN HTTFDGLSFK TFLENLASLL HEKPLSTPPC
201: NDRTLLKARD PPSVAFPHHE LVKFQDCETT TVFEATSEHL DFKIFKLSSE QIKKLKERAS ETSNGNVRVT GFNVVTALVW RCKALSVAAE EGEETNLERE
301: STILYAVDIR GRLNPELPPS YTGNAVLTAY AKEKCKALLE EPFGRIVEMV GEGSKRITDE YARSAIDWGE LYKGFPHGEV LVSSWWKLGF AEVEYPWGKP
401: KYSCPVVYHR KDIVLLFPDI DGDSKGVYVL AALPSKEMSK FQHWFEDTLC

Arabidopsis Description

GLC [Source:UniProtKB/TrEMBL;Acc:A0A178W297]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.