CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87979	Sorghum	cytosol	100.0	100.0
Zm00001d045092_P001	Maize	cytosol	91.72	90.68
EER89344	Sorghum	cytosol	77.47	77.12
EER98918	Sorghum	cytosol, peroxisome, plastid	52.87	50.77
EES07672	Sorghum	cytosol	43.68	42.13
EER98920	Sorghum	cytosol	41.61	41.8
KXG31953	Sorghum	cytosol, endoplasmic reticulum, peroxisome	40.69	40.78
EES15064	Sorghum	cytosol	40.23	39.5
EER96600	Sorghum	peroxisome	38.85	38.85
EES15065	Sorghum	cytosol, peroxisome, plastid	38.85	37.89
EES02456	Sorghum	cytosol, peroxisome, plastid	39.08	37.53
KXG31860	Sorghum	cytosol, peroxisome, plastid	37.47	37.39
OQU75613	Sorghum	cytosol, peroxisome, plastid	37.47	37.39
KXG31859	Sorghum	peroxisome	37.47	37.3
KXG31858	Sorghum	peroxisome	37.01	37.27
KXG31952	Sorghum	cytosol	35.4	37.11
KXG31861	Sorghum	cytosol, peroxisome, plastid	37.47	37.05
EES11073	Sorghum	mitochondrion	37.24	36.73
EES05411	Sorghum	cytosol	37.7	36.61
KXG31863	Sorghum	plastid	28.97	33.69
EES02467	Sorghum	cytosol, peroxisome, plastid	34.48	33.56
OQU86302	Sorghum	mitochondrion	18.16	32.24
OQU91195	Sorghum	cytosol	27.82	26.42
OQU83825	Sorghum	peroxisome, plastid	25.98	25.51
OQU89853	Sorghum	cytosol	25.52	25.06
EES09214	Sorghum	cytosol, peroxisome, plastid	24.37	23.4
EES10710	Sorghum	cytosol	24.14	22.93
EER88164	Sorghum	cytosol	16.32	20.46

Protein Annotations

Gene3D:3.30.559.10	MapMan:50.2.3	EntrezGene:8065424	UniProt:C5Z5T7	InterPro:CAT-like_dom_sf	ProteinID:EER87979.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0016747
InterPro:IPR023213	EnsemblPlants:KXG19490	ProteinID:KXG19490	ProteinID:KXG19490.2	PFAM:PF02458	PANTHER:PTHR31642
PANTHER:PTHR31642:SF56	EnsemblPlantsGene:SORBI_3010G066700	SUPFAM:SSF52777	unigene:Sbi.6189	InterPro:Transferase	UniParc:UPI0001A89192
RefSeq:XP_002436612.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:5341284..5343838

Molecular Weight (calculated)

46440.8 Da

IEP (calculated)

6.421

GRAVY (calculated)

0.132

Length

435 amino acids

Sequence
(BLAST)

001: MAMVELLSTE LVVPAEETPA GAVWLSNLDL AARRGYTPTV YFYRTNNKPE FFEADAVKDS LARALVAFYP LAGRLGLDAA TGRVQIDCTG EGAVFVTARS
101: EYALDELLNE FVPCDEMRHL LVPATPAPNP PCPLLFAQVT RLRCGGVVLG LALHHSVVDA RSAAHFVETW ASIARGGGGG GGDAPLPPCF DHRLLSARPP
201: ATRAVLYDHP EYKPEPAPEH AVAAGSAYAS AIITLSKSQV SALKARCAGA STFRAVVALV WQCACRARSL PADAETRLFS MVDMRARLAP PLPPGYFGNA
301: VIRTSALATV GEVVGNPVGY AARRALAATS QGDDYARSLV DYLEGVDAMN LPRSGISRAH LRAISWMGMS LHDSDFGWGA PVFMGPALMY YSGFVYVMQA
401: PGKEGAVALA LSLEPESMPE FRKVFADEVA RLQTI

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.