CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31860	Sorghum	cytosol, peroxisome, plastid	100.0	100.0
KXG31861	Sorghum	cytosol, peroxisome, plastid	91.06	90.23
EES02456	Sorghum	cytosol, peroxisome, plastid	91.28	87.86
KXG31859	Sorghum	peroxisome	83.26	83.07
KXG31858	Sorghum	peroxisome	74.31	75.0
KXG31953	Sorghum	cytosol, endoplasmic reticulum, peroxisome	73.17	73.5
KXG31863	Sorghum	plastid	60.32	70.32
EES02467	Sorghum	cytosol, peroxisome, plastid	66.51	64.88
KXG31952	Sorghum	cytosol	61.7	64.82
OQU86302	Sorghum	mitochondrion	34.86	62.04
EER96600	Sorghum	peroxisome	59.4	59.54
Os08t0543400-02	Rice	cytosol, plasma membrane	57.8	57.01
Os11t0182200-01	Rice	cytosol	53.9	52.57
TraesCS6D01G241700.1	Wheat	cytosol	52.29	52.05
TraesCS6A01G260900.1	Wheat	peroxisome	52.29	52.05
TraesCS6B01G288300.1	Wheat	peroxisome	52.06	51.95
HORVU6Hr1G066420.1	Barley	cytosol, peroxisome, plastid	52.52	50.66
HORVU0Hr1G023570.1	Barley	cytosol, peroxisome, plastid	52.52	50.33
TraesCS2A01G040800.1	Wheat	cytosol	50.46	48.67
HORVU2Hr1G112120.3	Barley	mitochondrion	26.38	46.37
Os08t0205000-00	Rice	cytosol	17.66	46.11
EER98920	Sorghum	cytosol	42.66	42.96
EES15064	Sorghum	cytosol	42.66	41.99
TraesCS2A01G040600.1	Wheat	cytosol	41.05	40.59
EES15065	Sorghum	cytosol, peroxisome, plastid	39.91	39.01
EES07672	Sorghum	cytosol	39.22	37.92
EER98918	Sorghum	cytosol, peroxisome, plastid	38.99	37.53
EER87979	Sorghum	cytosol	37.39	37.47
KXG19490	Sorghum	cytosol	37.39	37.47
EER89344	Sorghum	cytosol	36.24	36.16
EES11073	Sorghum	mitochondrion	34.17	33.79
EES05411	Sorghum	cytosol	33.95	33.04
OQU91195	Sorghum	cytosol	27.98	26.64
OQU83825	Sorghum	peroxisome, plastid	23.17	22.8
EES09214	Sorghum	cytosol, peroxisome, plastid	22.94	22.08
OQU89853	Sorghum	cytosol	22.25	21.9
EES10710	Sorghum	cytosol	21.33	20.31
EER88164	Sorghum	cytosol	15.6	19.6

Protein Annotations

Gene3D:3.30.559.10	MapMan:50.2.3	EntrezGene:8155732	UniProt:C6JSJ3	InterPro:CAT-like_dom_sf	ProteinID:EES20085.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:IPR023213	ProteinID:KXG18691.1
ProteinID:KXG31860.2	EnsemblPlants:OQU75613	ProteinID:OQU75613	ProteinID:OQU75613.1	PFAM:PF02458	PANTHER:PTHR31642
PANTHER:PTHR31642:SF16	EnsemblPlantsGene:SORBI_3K000400	unigene:Sbi.19205	InterPro:Transferase	UniParc:UPI0001AFF713	RefSeq:XP_002488970.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chrsuper_1023:-:2290..3713

Molecular Weight (calculated)

47751.5 Da

IEP (calculated)

5.923

GRAVY (calculated)

0.124

Length

436 amino acids

Sequence
(BLAST)

001: MDFEVQVIES SFVTPSEPAP RKVLWLSSLD LSLANQGHTP TIYLYSSSNN AAAADPFFDV ARLKEAMARA LVAFYPLAGR LGVNDADGRM EISCNGEGAL
101: FIVAQADDFT ANDVKKFKPS PELRRLFVPL IEPLSIILAV QVTFLKCGGV VLGTALHHAV VDALSAFHFF QTWSTFSKHG DCATVELPCH DRDLLRARSP
201: PTIHPDALLT FYPKHTFFDL SGPLAIEVFT ISRDQVAFLK HLCGGGTSTF CAVSALVWQC TCVARRLSPD SEARLTFPAN LRQRMRPPLP SCYIGNAMFY
301: LGITSVVRDI ATEVLGSVAG RIRGVIDQMD DELVHSAIDY FEMAEMDNRP PRGTLPQTVL HITSWLGLPQ YDADFGWGKP ELMSRAQSHC GGFVNLMNDD
401: DGAGSGGVRL LMCMEAVNIK EIERLLYAKL ALAACS

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.