Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G288300.1 | Wheat | peroxisome | 94.52 | 94.74 |
| TraesCS6A01G260900.1 | Wheat | peroxisome | 94.29 | 94.29 |
| HORVU6Hr1G066420.1 | Barley | cytosol, peroxisome, plastid | 93.15 | 90.27 |
| HORVU0Hr1G023570.1 | Barley | cytosol, peroxisome, plastid | 93.15 | 89.67 |
| KXG31953 | Sorghum | cytosol, endoplasmic reticulum, peroxisome | 57.31 | 57.83 |
| Zm00001d039956_P001 | Maize | peroxisome | 56.39 | 56.91 |
| Zm00001d039952_P002 | Maize | peroxisome | 55.94 | 56.32 |
| EER96600 | Sorghum | peroxisome | 54.79 | 55.17 |
| TraesCS3D01G492400.1 | Wheat | cytosol | 54.11 | 54.36 |
| KXG31861 | Sorghum | cytosol, peroxisome, plastid | 54.57 | 54.32 |
| Os08t0543400-02 | Rice | cytosol, plasma membrane | 54.34 | 53.85 |
| Os11t0182200-01 | Rice | cytosol | 53.88 | 52.8 |
| KXG31858 | Sorghum | peroxisome | 52.05 | 52.78 |
| Zm00001d039837_P002 | Maize | peroxisome | 51.37 | 52.69 |
| KXG31860 | Sorghum | cytosol, peroxisome, plastid | 52.05 | 52.29 |
| OQU75613 | Sorghum | cytosol, peroxisome, plastid | 52.05 | 52.29 |
| TraesCS3D01G514600.1 | Wheat | peroxisome | 53.2 | 52.24 |
| KXG31859 | Sorghum | peroxisome | 52.05 | 52.17 |
| TraesCS5D01G462600.1 | Wheat | peroxisome | 53.42 | 52.12 |
| TraesCS7D01G436700.1 | Wheat | peroxisome | 50.68 | 51.99 |
| Zm00001d039840_P001 | Maize | peroxisome | 51.83 | 51.95 |
| Zm00001d039947_P002 | Maize | plasma membrane | 55.25 | 51.93 |
| Zm00001d039833_P001 | Maize | cytosol | 52.97 | 51.9 |
| EES02456 | Sorghum | cytosol, peroxisome, plastid | 53.2 | 51.43 |
| TraesCS3D01G441400.1 | Wheat | cytosol, plasma membrane, plastid | 25.11 | 51.4 |
| KXG31952 | Sorghum | cytosol | 48.63 | 51.33 |
| OQU86302 | Sorghum | mitochondrion | 27.63 | 49.39 |
| KXG31863 | Sorghum | plastid | 41.78 | 48.93 |
| Zm00001d005607_P001 | Maize | cytosol | 48.86 | 48.75 |
| TraesCS7D01G015400.1 | Wheat | peroxisome | 49.32 | 48.54 |
| Os08t0205000-00 | Rice | cytosol | 18.49 | 48.5 |
| EES02467 | Sorghum | cytosol, peroxisome, plastid | 48.86 | 47.87 |
| TraesCS6D01G025800.1 | Wheat | peroxisome | 46.8 | 46.8 |
| Zm00001d039951_P001 | Maize | nucleus | 32.19 | 45.93 |
| TraesCS7D01G524200.1 | Wheat | cytosol | 43.38 | 43.58 |
| TraesCS5D01G230500.1 | Wheat | cytosol | 41.32 | 42.0 |
| TraesCS5D01G230700.1 | Wheat | plastid | 40.87 | 40.87 |
| TraesCS7D01G151400.1 | Wheat | cytosol | 39.95 | 40.7 |
| TraesCS7D01G151800.1 | Wheat | cytosol | 39.5 | 40.14 |
| TraesCS7D01G151900.1 | Wheat | cytosol | 38.36 | 39.16 |
| TraesCS3D01G314900.1 | Wheat | peroxisome | 38.36 | 38.1 |
| TraesCS6D01G203000.1 | Wheat | cytosol | 36.3 | 35.97 |
| TraesCS2D01G354300.1 | Wheat | mitochondrion | 35.84 | 35.84 |
| TraesCS3D01G525000.1 | Wheat | mitochondrion | 34.93 | 34.62 |
| TraesCS1D01G021600.1 | Wheat | mitochondrion | 34.47 | 34.24 |
| TraesCS6D01G359800.1 | Wheat | peroxisome | 25.57 | 25.45 |
| TraesCS4D01G024500.1 | Wheat | cytosol | 25.11 | 24.61 |
| TraesCS2D01G491100.1 | Wheat | cytosol | 24.66 | 24.49 |
| TraesCS2D01G490400.1 | Wheat | cytosol | 24.2 | 24.04 |
| TraesCS2D01G490900.1 | Wheat | cytosol | 23.97 | 23.81 |
| TraesCS5D01G342100.1 | Wheat | cytosol | 23.29 | 23.5 |
| TraesCS1D01G089900.1 | Wheat | cytosol | 23.29 | 23.29 |
| TraesCS1D01G089600.1 | Wheat | cytosol | 23.06 | 23.06 |
| TraesCS5D01G342400.1 | Wheat | cytosol, golgi, plastid | 22.83 | 23.04 |
| TraesCS5D01G342300.1 | Wheat | cytosol | 22.6 | 22.81 |
| TraesCS2D01G568200.1 | Wheat | mitochondrion | 22.15 | 22.56 |
| TraesCS5D01G310800.1 | Wheat | cytosol | 22.37 | 22.48 |
| TraesCS4D01G300400.1 | Wheat | cytosol, extracellular, peroxisome | 21.92 | 22.27 |
| TraesCS2D01G582000.1 | Wheat | cytosol | 22.37 | 22.27 |
| TraesCS5D01G342700.1 | Wheat | cytosol | 22.37 | 22.22 |
| TraesCS5D01G154500.1 | Wheat | plastid | 22.83 | 22.22 |
| TraesCS4D01G359800.1 | Wheat | cytosol | 21.69 | 22.04 |
| TraesCS3D01G545300.1 | Wheat | cytosol | 22.6 | 21.95 |
| TraesCS6D01G273300.1 | Wheat | cytosol | 22.15 | 21.9 |
| TraesCS4D01G300800.1 | Wheat | cytosol, extracellular, peroxisome | 21.92 | 21.82 |
| TraesCS4D01G300500.1 | Wheat | peroxisome | 22.37 | 21.73 |
| TraesCS5D01G342800.1 | Wheat | cytosol | 21.69 | 21.64 |
| TraesCS2D01G581500.1 | Wheat | cytosol | 21.69 | 21.64 |
| TraesCS2D01G016600.1 | Wheat | cytosol | 22.83 | 21.41 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G241700.1 | EnsemblPlantsGene:TraesCS6D01G241700 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | SEG:seg | SUPFAM:SSF52777 | MapMan:50.2.3 | : | : |
Description
No Description!
Coordinates
chr6D:-:344057621..344058937
Molecular Weight (calculated)
47570.1 Da
IEP (calculated)
8.134
GRAVY (calculated)
-0.012
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSGSALRVV ESCLVTPSDE TPREGLWLSA LDLVLANRGH TPLVHVYSAS DDAAADGFFN VAKLKKSMAK ALVPFYPLAG RLGADRDGRI QIDCNGEGAL
101: FVVARSDRTV EDFSGPTPSS ELTKLFCPRV QPSSIMLAAQ VTFLKCGGVV LGTAVHHAAV DGSSAFHFIG TWARYCRDGQ GAVIELPCHD RALLRARSPP
201: AIHPETVSMF CSKLSMHEHE SSVLATKVIT ISGDQLYALK RHCGGASTFC AVSALVWQCV CIARQLDPDA TTRMNFPVDI RHRLKPRLPG RYFGNGVVNV
301: FATAAVKDVV SETLASVASR VKATTEQLDD ELLRSAVDYF ETEAAKGGRP EDRGNLPETE LRMNSWFHLP IYDANFGWGK PRVMTRAETA RGGWVYVMAG
401: CGDGSARVLI SLEAATLKRF ERALAVCRVQ TGIVHTRL
101: FVVARSDRTV EDFSGPTPSS ELTKLFCPRV QPSSIMLAAQ VTFLKCGGVV LGTAVHHAAV DGSSAFHFIG TWARYCRDGQ GAVIELPCHD RALLRARSPP
201: AIHPETVSMF CSKLSMHEHE SSVLATKVIT ISGDQLYALK RHCGGASTFC AVSALVWQCV CIARQLDPDA TTRMNFPVDI RHRLKPRLPG RYFGNGVVNV
301: FATAAVKDVV SETLASVASR VKATTEQLDD ELLRSAVDYF ETEAAKGGRP EDRGNLPETE LRMNSWFHLP IYDANFGWGK PRVMTRAETA RGGWVYVMAG
401: CGDGSARVLI SLEAATLKRF ERALAVCRVQ TGIVHTRL
001: MQELPDCLYE ENQPTLITPL SPTPNHSLYL SNLDDHHFLR FSIKYLYLFQ KSISPLTLKD SLSRVLVDYY PFAGRIRVSD EGSKLEVDCN GEGAVFAEAF
101: MDITCQDFVQ LSPKPNKSWR KLLFKVQAQS FLDIPPLVIQ VTYLRCGGMI LCTAINHCLC DGIGTSQFLH AWAHATTSQA HLPTRPFHSR HVLDPRNPPR
201: VTHSHPGFTR TTTVDKSSTF DISKYLQSQP LAPATLTFNQ SHLLRLKKTC APSLKCTTFE ALAANTWRSW AQSLDLPMTM LVKLLFSVNM RKRLTPELPQ
301: GYYGNGFVLA CAESKVQDLV NGNIYHAVKS IQEAKSRITD EYVRSTIDLL EDKTVKTDVS CSLVISQWAK LGLEELDLGG GKPMYMGPLT SDIYCLFLPV
401: ASDNDAIRVQ MSLPEEVVKR LEYCMVKFLD GKDNEDENSR AC
101: MDITCQDFVQ LSPKPNKSWR KLLFKVQAQS FLDIPPLVIQ VTYLRCGGMI LCTAINHCLC DGIGTSQFLH AWAHATTSQA HLPTRPFHSR HVLDPRNPPR
201: VTHSHPGFTR TTTVDKSSTF DISKYLQSQP LAPATLTFNQ SHLLRLKKTC APSLKCTTFE ALAANTWRSW AQSLDLPMTM LVKLLFSVNM RKRLTPELPQ
301: GYYGNGFVLA CAESKVQDLV NGNIYHAVKS IQEAKSRITD EYVRSTIDLL EDKTVKTDVS CSLVISQWAK LGLEELDLGG GKPMYMGPLT SDIYCLFLPV
401: ASDNDAIRVQ MSLPEEVVKR LEYCMVKFLD GKDNEDENSR AC
Arabidopsis Description
At1g27620 [Source:UniProtKB/TrEMBL;Acc:Q9S808]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.