Factsheet for TraesCS5D01G462600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G461000.1	Wheat	peroxisome	93.1	92.27
HORVU5Hr1G108900.1	Barley	peroxisome	91.54	91.54
TraesCS3D01G514600.1	Wheat	peroxisome	77.95	78.48
TraesCS7D01G436700.1	Wheat	peroxisome	73.94	77.75
TraesCS3D01G492400.1	Wheat	cytosol	72.38	74.54
TraesCS3D01G441400.1	Wheat	cytosol, plasma membrane, plastid	30.07	63.08
TraesCS6D01G025800.1	Wheat	peroxisome	55.9	57.31
TraesCS7D01G015400.1	Wheat	peroxisome	56.35	56.85
TraesCS6D01G241700.1	Wheat	cytosol	52.12	53.42
TraesCS7D01G524200.1	Wheat	cytosol	45.66	47.02
TraesCS5D01G230500.1	Wheat	cytosol	44.32	46.17
TraesCS5D01G230700.1	Wheat	plastid	40.98	42.01
TraesCS7D01G151900.1	Wheat	cytosol	38.75	40.56
TraesCS7D01G151400.1	Wheat	cytosol	38.31	40.0
TraesCS7D01G151800.1	Wheat	cytosol	37.64	39.21
TraesCS3D01G314900.1	Wheat	peroxisome	38.31	39.0
TraesCS2D01G354300.1	Wheat	mitochondrion	36.75	37.67
TraesCS6D01G203000.1	Wheat	cytosol	36.97	37.56
TraesCS3D01G525000.1	Wheat	mitochondrion	36.08	36.65
TraesCS1D01G021600.1	Wheat	mitochondrion	35.86	36.51
TraesCS4D01G024500.1	Wheat	cytosol	27.62	27.74
TraesCS2D01G490400.1	Wheat	cytosol	26.5	26.98
TraesCS4D01G300800.1	Wheat	cytosol, extracellular, peroxisome	26.06	26.59
TraesCS2D01G490900.1	Wheat	cytosol	26.06	26.53
TraesCS5D01G342100.1	Wheat	cytosol	25.39	26.27
TraesCS4D01G300400.1	Wheat	cytosol, extracellular, peroxisome	25.17	26.22
TraesCS6D01G359800.1	Wheat	peroxisome	25.61	26.14
TraesCS2D01G491100.1	Wheat	cytosol	25.61	26.08
TraesCS5D01G342300.1	Wheat	cytosol	25.17	26.04
TraesCS5D01G310800.1	Wheat	cytosol	25.17	25.92
TraesCS5D01G342700.1	Wheat	cytosol	25.39	25.85
TraesCS5D01G342400.1	Wheat	cytosol, golgi, plastid	24.94	25.81
TraesCS4D01G359800.1	Wheat	cytosol	24.72	25.75
TraesCS5D01G342800.1	Wheat	cytosol	24.72	25.28
TraesCS2D01G568200.1	Wheat	mitochondrion	24.05	25.12
TraesCS1D01G089900.1	Wheat	cytosol	23.83	24.43
TraesCS2D01G582000.1	Wheat	cytosol	23.83	24.32
TraesCS1D01G089600.1	Wheat	cytosol	23.61	24.2
TraesCS2D01G581500.1	Wheat	cytosol	23.61	24.15
TraesCS4D01G300500.1	Wheat	peroxisome	23.83	23.73
TraesCS5D01G154500.1	Wheat	plastid	23.16	23.11
TraesCS3D01G545300.1	Wheat	cytosol	23.16	23.06
TraesCS2D01G016600.1	Wheat	cytosol	23.83	22.91
TraesCS6D01G273300.1	Wheat	cytosol	22.05	22.35

Protein Annotations

EnsemblPlants:TraesCS5D01G462600.1	EnsemblPlantsGene:TraesCS5D01G462600	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF16
PFAM:PF02458	SUPFAM:SSF52777	MapMan:50.2.3	:	:	:

Description

No Description!

Coordinates

chr5D:-:506161982..506163331

Molecular Weight (calculated)

48548.4 Da

IEP (calculated)

8.103

GRAVY (calculated)

0.104

Length

449 amino acids

Sequence
(BLAST)

001: MGAVLSKEKK RRSGAVVQEV KVVESCMVAP SEQTPRHGLW LSPLDLMLVN RGHTPTVYFY RSESGDFFDV ARLKAAMAKA LVAFYPLAGR LGVGSRDGRL
101: VIDCAGQGVL FVVARSDLAV DDFSTFKPSP ELRRLFVPRV DDYSPPVMCA VQVSFLKCGG VALGTALHHV AADAISAFHF FQTWSAFSRD DDAAVAALEP
201: QFHDRTLLRA RSPPFVHPDA LTVFCPKLNL STEPSAGPVV SEAFDISKDQ VAALKSACIS GDGGRVSTFC AVSAHVWRCV CVARRLPPEA TTRLTFPASV
301: RRSLRPPLPA GYFGNGIIWL GAAGQVRDVA SSDGLASTAS RIRGAVRRMD DELVRSAIDY FELTAEADSK PAPGRMAETE LRVISWLGMP VYDADFGWGK
401: PLAMLRAEAE RAGFVYLMDG GQGAGSVHVV ICTEAAILSD FQRLLYAKF

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.