Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G026800.1 | Wheat | cytosol | 90.6 | 91.01 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 30.87 | 88.46 |
| TraesCS4A01G287700.1 | Wheat | mitochondrion | 30.87 | 88.46 |
| HORVU4Hr1G004050.1 | Barley | cytosol | 86.58 | 87.16 |
| TraesCS4A01G285200.1 | Wheat | cytosol | 90.38 | 86.88 |
| TraesCS4A01G287500.1 | Wheat | cytosol | 90.16 | 86.67 |
| GSMUA_Achr8P03170_001 | Banana | cytosol | 44.07 | 52.39 |
| TraesCS5D01G342800.1 | Wheat | cytosol | 50.56 | 51.48 |
| TraesCS2D01G491100.1 | Wheat | cytosol | 50.78 | 51.47 |
| TraesCS5D01G342700.1 | Wheat | cytosol | 50.78 | 51.47 |
| Solyc11g066640.1.1 | Tomato | cytosol | 50.34 | 51.25 |
| TraesCS2D01G490900.1 | Wheat | cytosol | 50.56 | 51.25 |
| GSMUA_Achr8P03210_001 | Banana | cytosol | 40.27 | 51.14 |
| PGSC0003DMT400001145 | Potato | cytosol | 50.11 | 50.79 |
| Solyc06g074710.1.1 | Tomato | cytosol | 50.34 | 50.68 |
| PGSC0003DMT400018441 | Potato | cytosol | 50.11 | 50.34 |
| TraesCS2D01G490400.1 | Wheat | cytosol | 49.44 | 50.11 |
| GSMUA_Achr8P15170_001 | Banana | cytosol | 42.95 | 49.74 |
| GSMUA_Achr8P03190_001 | Banana | cytosol | 38.48 | 49.57 |
| TraesCS5D01G342100.1 | Wheat | cytosol | 48.1 | 49.54 |
| TraesCS5D01G310800.1 | Wheat | cytosol | 48.1 | 49.31 |
| TraesCS5D01G342400.1 | Wheat | cytosol, golgi, plastid | 47.87 | 49.31 |
| TraesCS6D01G359800.1 | Wheat | peroxisome | 48.32 | 49.09 |
| TraesCS5D01G342300.1 | Wheat | cytosol | 47.65 | 49.08 |
| GSMUA_Achr8P03200_001 | Banana | cytosol | 37.81 | 48.99 |
| Solyc11g071470.1.1 | Tomato | cytosol | 47.87 | 48.31 |
| Solyc11g071480.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 47.43 | 47.86 |
| GSMUA_Achr8P03180_001 | Banana | plastid | 43.4 | 47.43 |
| TraesCS3D01G545300.1 | Wheat | cytosol | 45.86 | 45.45 |
| TraesCS2D01G016600.1 | Wheat | cytosol | 46.31 | 44.33 |
| PGSC0003DMT400048126 | Potato | cytosol | 43.4 | 43.02 |
| TraesCS4D01G359800.1 | Wheat | cytosol | 37.58 | 38.98 |
| TraesCS1D01G089600.1 | Wheat | cytosol | 37.81 | 38.58 |
| TraesCS1D01G089900.1 | Wheat | cytosol | 37.58 | 38.36 |
| TraesCS4D01G300400.1 | Wheat | cytosol, extracellular, peroxisome | 36.91 | 38.28 |
| TraesCS4D01G300800.1 | Wheat | cytosol, extracellular, peroxisome | 37.14 | 37.73 |
| PGSC0003DMT400048130 | Potato | cytoskeleton, cytosol, peroxisome | 47.43 | 37.26 |
| TraesCS2D01G568200.1 | Wheat | mitochondrion | 35.79 | 37.21 |
| TraesCS2D01G582000.1 | Wheat | cytosol | 35.79 | 36.36 |
| TraesCS2D01G581500.1 | Wheat | cytosol | 35.12 | 35.76 |
| TraesCS4D01G300500.1 | Wheat | peroxisome | 36.02 | 35.7 |
| TraesCS5D01G154500.1 | Wheat | plastid | 35.35 | 35.11 |
| TraesCS6D01G273300.1 | Wheat | cytosol | 34.23 | 34.54 |
| TraesCS5D01G230500.1 | Wheat | cytosol | 28.86 | 29.93 |
| TraesCS6D01G203000.1 | Wheat | cytosol | 29.53 | 29.86 |
| TraesCS7D01G524200.1 | Wheat | cytosol | 28.86 | 29.59 |
| TraesCS3D01G492400.1 | Wheat | cytosol | 28.19 | 28.9 |
| TraesCS1D01G021600.1 | Wheat | mitochondrion | 28.41 | 28.8 |
| KRH02826 | Soybean | cytosol | 29.08 | 28.57 |
| TraesCS2D01G354300.1 | Wheat | mitochondrion | 27.96 | 28.54 |
| TraesCS3D01G525000.1 | Wheat | mitochondrion | 27.96 | 28.28 |
| TraesCS5D01G230700.1 | Wheat | plastid | 27.52 | 28.08 |
| KRH02825 | Soybean | cytosol | 28.64 | 27.83 |
| TraesCS5D01G462600.1 | Wheat | peroxisome | 27.74 | 27.62 |
| TraesCS6D01G025800.1 | Wheat | peroxisome | 26.85 | 27.4 |
| Bra024450.1-P | Field mustard | cytosol | 23.27 | 27.37 |
| CDY56515 | Canola | cytosol | 23.27 | 27.37 |
| CDY62143 | Canola | cytosol | 23.27 | 27.37 |
| TraesCS7D01G151900.1 | Wheat | cytosol | 26.17 | 27.27 |
| VIT_11s0103g00200.t01 | Wine grape | cytosol | 27.74 | 27.19 |
| TraesCS3D01G514600.1 | Wheat | peroxisome | 27.07 | 27.13 |
| TraesCS7D01G436700.1 | Wheat | peroxisome | 25.73 | 26.93 |
| KRH46099 | Soybean | cytosol, plastid | 26.85 | 26.55 |
| TraesCS7D01G151400.1 | Wheat | cytosol | 25.5 | 26.51 |
| TraesCS3D01G314900.1 | Wheat | peroxisome | 25.95 | 26.3 |
| TraesCS7D01G151800.1 | Wheat | cytosol | 25.28 | 26.22 |
| TraesCS3D01G441400.1 | Wheat | cytosol, plasma membrane, plastid | 12.53 | 26.17 |
| TraesCS7D01G015400.1 | Wheat | peroxisome | 25.95 | 26.07 |
| KRH46094 | Soybean | plastid | 27.07 | 26.02 |
| KRG98873 | Soybean | mitochondrion | 26.85 | 25.97 |
| VIT_11s0037g00570.t01 | Wine grape | mitochondrion | 25.73 | 25.84 |
| KRG89744 | Soybean | cytosol | 26.62 | 25.65 |
| KRH08423 | Soybean | cytosol | 25.5 | 25.5 |
| CDY66506 | Canola | cytosol | 25.06 | 25.34 |
| KRG98872 | Soybean | cytosol, peroxisome, plastid | 26.4 | 25.32 |
| VIT_11s0037g00580.t01 | Wine grape | mitochondrion | 25.73 | 25.16 |
| TraesCS6D01G241700.1 | Wheat | cytosol | 24.61 | 25.11 |
| KRH06686 | Soybean | peroxisome | 25.73 | 24.73 |
| CDY03367 | Canola | cytosol | 24.83 | 24.61 |
| KRG98867 | Soybean | endoplasmic reticulum | 24.83 | 24.5 |
| KRH32581 | Soybean | cytosol | 23.49 | 24.42 |
| Bra038561.1-P | Field mustard | cytosol | 24.61 | 24.39 |
| KRH46095 | Soybean | plastid | 25.95 | 24.37 |
| KRH46097 | Soybean | cytosol | 12.3 | 24.34 |
| KRH32575 | Soybean | cytosol | 24.38 | 24.33 |
| KRH46098 | Soybean | cytosol | 24.61 | 24.12 |
| AT2G19070.1 | Thale cress | cytosol | 24.16 | 23.95 |
| KRG98866 | Soybean | cytosol | 23.94 | 23.78 |
| KRH06685 | Soybean | plastid | 24.38 | 23.75 |
| KRH13469 | Soybean | cytosol | 24.38 | 23.75 |
| KRH70082 | Soybean | cytosol | 14.09 | 23.33 |
| KRH30196 | Soybean | cytosol | 25.06 | 23.28 |
| KRH30198 | Soybean | cytosol | 25.06 | 23.28 |
| KRG98999 | Soybean | mitochondrion, peroxisome, plastid | 24.61 | 22.92 |
| KRH53324 | Soybean | cytosol | 12.3 | 22.73 |
| KRG98868 | Soybean | cytosol | 21.92 | 22.58 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G024500.1 | EnsemblPlantsGene:TraesCS4D01G024500 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF13 |
| PFAM:PF02458 | MapMan:50.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:10768942..10770285
Molecular Weight (calculated)
48867.3 Da
IEP (calculated)
6.631
GRAVY (calculated)
-0.161
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVKIESSKI VKPLYEDGEA PPARWVPLSV FDKVTYGEHV ALIFAFRPPN PPNSEVELGL AKALAVYREW AGRIGDGPDG RRSVLLNDAG ARFVEATVDA
101: PMAVSLPSGP SPEVRRLHPR IDDGPVELVQ VQLTRFSCGS LAVGFAGHHQ IADGQATANF LAAWGLATRR LPLSPLPVCD RGTRFAPRDP PLVEYPHQEV
201: EYRAPAPNKK CDVAVDEEEE EIGFGTAGHD KVKVHRMHLS KDFVARLKAQ ASSGLPPLRR SYTTFQSVVA HLWRAITAAR GLGAGVTTKV RISVNGRTRM
301: RPPVPRDYFG NVVLWAFPRS DAGDLVSRPV GHAAELVYRA VADVDDTYFR SFVDFAAEGE AEGLVPTADS EQAVLCPDLE VDAWLGINFH GLDFGGGGPF
401: RVMPTYYPME GSLFLVPSAL GDGSMEAYVA LFHNHLEEFK RICHKIT
101: PMAVSLPSGP SPEVRRLHPR IDDGPVELVQ VQLTRFSCGS LAVGFAGHHQ IADGQATANF LAAWGLATRR LPLSPLPVCD RGTRFAPRDP PLVEYPHQEV
201: EYRAPAPNKK CDVAVDEEEE EIGFGTAGHD KVKVHRMHLS KDFVARLKAQ ASSGLPPLRR SYTTFQSVVA HLWRAITAAR GLGAGVTTKV RISVNGRTRM
301: RPPVPRDYFG NVVLWAFPRS DAGDLVSRPV GHAAELVYRA VADVDDTYFR SFVDFAAEGE AEGLVPTADS EQAVLCPDLE VDAWLGINFH GLDFGGGGPF
401: RVMPTYYPME GSLFLVPSAL GDGSMEAYVA LFHNHLEEFK RICHKIT
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.