Factsheet for TraesCSU01G241400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G287700.1	Wheat	mitochondrion	100.0	100.0
TraesCS4A01G287500.1	Wheat	cytosol	100.0	33.55
HORVU4Hr1G004050.1	Barley	cytosol	91.03	31.98
TraesCS4D01G024500.1	Wheat	cytosol	88.46	30.87
TraesCS6B01G430300.1	Wheat	cytosol	88.46	30.67
TraesCS4B01G026800.1	Wheat	cytosol	83.97	29.44
GSMUA_Achr8P03190_001	Banana	cytosol	50.0	22.48
GSMUA_Achr8P03200_001	Banana	cytosol	48.72	22.03
GSMUA_Achr8P15170_001	Banana	cytosol	54.49	22.02
GSMUA_Achr8P03210_001	Banana	cytosol	49.36	21.88
GSMUA_Achr8P03170_001	Banana	cytosol	47.44	19.68
GSMUA_Achr8P03180_001	Banana	plastid	47.44	18.09
Solyc11g066640.1.1	Tomato	cytosol	50.0	17.77
PGSC0003DMT400001145	Potato	cytosol	50.0	17.69
Solyc06g074710.1.1	Tomato	cytosol	48.72	17.12
PGSC0003DMT400018441	Potato	cytosol	48.72	17.08
Solyc11g071470.1.1	Tomato	cytosol	44.87	15.8
Solyc11g071480.1.1	Tomato	cytoskeleton, cytosol, peroxisome	44.23	15.58
KRH46097	Soybean	cytosol	22.44	15.49
KRH53324	Soybean	cytosol	23.08	14.88
TraesCSU01G038200.1	Wheat	peroxisome	35.9	12.47
PGSC0003DMT400048130	Potato	cytoskeleton, cytosol, peroxisome	43.59	11.95
CDY62143	Canola	cytosol	28.21	11.58
CDY56515	Canola	cytosol	28.21	11.58
Bra024450.1-P	Field mustard	cytosol	28.21	11.58
PGSC0003DMT400048126	Potato	cytosol	31.41	10.86
TraesCSU01G217900.1	Wheat	peroxisome	23.08	10.65
KRH02826	Soybean	cytosol	29.49	10.11
KRH02825	Soybean	cytosol	28.21	9.57
KRH46099	Soybean	cytosol, plastid	27.56	9.51
VIT_11s0103g00200.t01	Wine grape	cytosol	27.56	9.43
AT2G19070.1	Thale cress	cytosol	26.92	9.31
TraesCSU01G235600.1	Wheat	cytosol	26.28	9.3
KRH08423	Soybean	cytosol	25.64	8.95
CDY66506	Canola	cytosol	25.0	8.82
VIT_11s0037g00570.t01	Wine grape	mitochondrion	25.0	8.76
Bra038561.1-P	Field mustard	cytosol	25.0	8.65
VIT_11s0037g00580.t01	Wine grape	mitochondrion	25.0	8.53
TraesCSU01G078600.1	Wheat	peroxisome	23.72	8.43
CDY03367	Canola	cytosol	24.36	8.43
KRH06686	Soybean	peroxisome	25.0	8.39
TraesCSU01G078900.1	Wheat	peroxisome	23.08	8.2
KRH46095	Soybean	plastid	25.0	8.19
KRH46094	Soybean	plastid	24.36	8.17
KRG98872	Soybean	cytosol, peroxisome, plastid	24.36	8.15
KRH32581	Soybean	cytosol	22.44	8.14
KRG89744	Soybean	cytosol	23.72	7.97
KRH06685	Soybean	plastid	23.08	7.84
KRH32575	Soybean	cytosol	22.44	7.81
TraesCSU01G078800.1	Wheat	peroxisome	17.95	7.8
TraesCSU01G148700.1	Wheat	peroxisome	23.08	7.79
KRG98873	Soybean	mitochondrion	23.08	7.79
KRG98867	Soybean	endoplasmic reticulum	21.79	7.51
KRG98999	Soybean	mitochondrion, peroxisome, plastid	23.08	7.5
KRH46098	Soybean	cytosol	21.79	7.46
KRH30196	Soybean	cytosol	22.44	7.28
KRH30198	Soybean	cytosol	22.44	7.28
KRH13469	Soybean	cytosol	21.15	7.19
TraesCSU01G079000.1	Wheat	peroxisome	21.15	7.17
KRG98868	Soybean	cytosol	19.87	7.14
KRG98866	Soybean	cytosol	20.51	7.11
TraesCSU01G220000.1	Wheat	cytosol	1.28	0.74
KRH70082	Soybean	cytosol	0.64	0.37
TraesCSU01G078700.1	Wheat	cytosol	0.0	0.0
TraesCSU01G244500.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCSU01G241400.1	EnsemblPlantsGene:TraesCSU01G241400	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF13
PFAM:PF02458	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:360832427..360832926

Molecular Weight (calculated)

17154.4 Da

IEP (calculated)

4.495

GRAVY (calculated)

0.004

Length

156 amino acids

Sequence
(BLAST)

001: MNGRTRMRPP MPRDYFGNVV LWAFPRTDAG DLMSRPVGHA AELVYRAVAD VDNAYFRSFV DLASSGVVEA EGLVSTADSE QAVLCPDLEV DAWLGINFHG
101: LNFGGGGPFR VMPTYYPMEG SLFLVPSTLG DGSMEAYVAL FDDHLAEFKR ICHKID

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.