Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G078700.1 | Wheat | cytosol | 31.75 | 78.08 |
| HORVU6Hr1G012740.1 | Barley | peroxisome | 68.8 | 56.39 |
| TraesCSU01G148700.1 | Wheat | peroxisome | 71.59 | 55.63 |
| TraesCSU01G220000.1 | Wheat | cytosol | 41.5 | 55.39 |
| TraesCSU01G078600.1 | Wheat | peroxisome | 64.35 | 52.62 |
| TraesCSU01G079000.1 | Wheat | peroxisome | 67.41 | 52.61 |
| TraesCSU01G078900.1 | Wheat | peroxisome | 64.07 | 52.39 |
| TraesCSU01G217900.1 | Wheat | peroxisome | 46.52 | 49.41 |
| TraesCSU01G235600.1 | Wheat | cytosol | 59.05 | 48.07 |
| TraesCSU01G244500.1 | Wheat | cytosol | 10.31 | 20.33 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 7.8 | 17.95 |
| TraesCSU01G038200.1 | Wheat | peroxisome | 20.06 | 16.04 |
Protein Annotations
| EnsemblPlants:TraesCSU01G078800.1 | EnsemblPlantsGene:TraesCSU01G078800 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | SEG:seg | MapMan:50.2.3 | : | : | : |
Description
No Description!
Coordinates
chrUn:-:71192708..71200085
Molecular Weight (calculated)
39918.1 Da
IEP (calculated)
8.399
GRAVY (calculated)
-0.072
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEEEVQVV ESCFVTPAAD TPRKTLWLSA LDLMLANKGY TPLVHFYRRC PGTETTDFFN GTKLKTALGM ALVGFYHGQP PQGGRRRQVR DRLQQQGHAF
101: LLARSQLTID DFSNLKPSPR LRRLFVPQIL PAEVCATQVT FFKCGGVAFG TAVHHGTMDG ISAFHFFQTW STFSRDGDRA VINLSQPSGP VINEVFTLRK
201: DQLSTLKRIC GASGVSTFSA MSAHLWQCIV ADEACGIASG DLAYIAHRIK DTLGQVDDEL VRSAVDYLEL DQAKRDNSPA IGNLLATDMR VVSWLGMPLY
301: DVDFSWGKPL AMLRAQSNRG GFAHLIDRAH IVMCIDATIH KEFKRLLYAK FESMVYSKF
101: LLARSQLTID DFSNLKPSPR LRRLFVPQIL PAEVCATQVT FFKCGGVAFG TAVHHGTMDG ISAFHFFQTW STFSRDGDRA VINLSQPSGP VINEVFTLRK
201: DQLSTLKRIC GASGVSTFSA MSAHLWQCIV ADEACGIASG DLAYIAHRIK DTLGQVDDEL VRSAVDYLEL DQAKRDNSPA IGNLLATDMR VVSWLGMPLY
301: DVDFSWGKPL AMLRAQSNRG GFAHLIDRAH IVMCIDATIH KEFKRLLYAK FESMVYSKF
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.