Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G025800.1 | Wheat | peroxisome | 71.92 | 71.92 |
| TraesCSU01G078700.1 | Wheat | cytosol | 23.74 | 71.23 |
| TraesCSU01G078900.1 | Wheat | peroxisome | 71.23 | 71.07 |
| TraesCSU01G078600.1 | Wheat | peroxisome | 70.78 | 70.61 |
| TraesCS6B01G030300.1 | Wheat | peroxisome | 70.78 | 70.61 |
| TraesCS6A01G022100.1 | Wheat | peroxisome | 73.97 | 70.13 |
| TraesCSU01G220000.1 | Wheat | cytosol | 42.92 | 69.89 |
| TraesCSU01G217900.1 | Wheat | peroxisome | 53.88 | 69.82 |
| TraesCS6B01G030800.1 | Wheat | peroxisome | 69.86 | 69.7 |
| TraesCSU01G078800.1 | Wheat | peroxisome | 56.39 | 68.8 |
| TraesCSU01G079000.1 | Wheat | peroxisome | 72.15 | 68.7 |
| TraesCSU01G148700.1 | Wheat | peroxisome | 71.69 | 67.97 |
| TraesCS6A01G022900.1 | Wheat | cytosol, plasma membrane, plastid | 45.66 | 66.23 |
| TraesCSU01G235600.1 | Wheat | cytosol | 65.98 | 65.53 |
| HORVU5Hr1G108900.1 | Barley | peroxisome | 57.53 | 56.12 |
| HORVU3Hr1G097120.2 | Barley | cytosol, plasma membrane | 52.28 | 51.58 |
| HORVU6Hr1G081260.1 | Barley | peroxisome | 53.88 | 49.68 |
| HORVU6Hr1G066420.1 | Barley | cytosol, peroxisome, plastid | 46.8 | 45.35 |
| HORVU0Hr1G023570.1 | Barley | cytosol, peroxisome, plastid | 46.8 | 45.05 |
| HORVU2Hr1G112120.3 | Barley | mitochondrion | 24.43 | 43.15 |
| HORVU7Hr1G118090.1 | Barley | cytosol | 39.95 | 39.95 |
| HORVU5Hr1G064280.1 | Barley | plastid | 37.9 | 37.9 |
| HORVU7Hr1G030670.1 | Barley | mitochondrion | 37.67 | 35.79 |
| HORVU7Hr1G030780.1 | Barley | cytosol | 34.25 | 34.88 |
| HORVU7Hr1G030740.3 | Barley | cytosol | 33.56 | 33.95 |
| HORVU6Hr1G056230.2 | Barley | cytosol | 32.19 | 31.97 |
| HORVU1Hr1G081430.3 | Barley | cytosol, peroxisome, plastid | 26.48 | 30.45 |
| HORVU2Hr1G109430.2 | Barley | cytosol | 25.11 | 25.11 |
| HORVU2Hr1G086380.1 | Barley | cytosol, nucleus, plastid | 33.1 | 24.91 |
| HORVU6Hr1G088530.1 | Barley | cytosol | 9.13 | 24.24 |
| HORVU2Hr1G109590.1 | Barley | cytosol | 17.81 | 24.15 |
| HORVU4Hr1G004050.1 | Barley | cytosol | 23.52 | 23.2 |
| HORVU2Hr1G125370.1 | Barley | cytosol | 22.6 | 23.18 |
| HORVU6Hr1G088480.1 | Barley | extracellular, plasma membrane | 24.66 | 22.93 |
| HORVU4Hr1G077790.1 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 23.29 | 22.82 |
| HORVU4Hr1G077720.7 | Barley | cytosol, extracellular, peroxisome | 22.37 | 22.74 |
| HORVU2Hr1G125270.1 | Barley | peroxisome | 22.83 | 22.73 |
| HORVU2Hr1G109470.1 | Barley | cytosol | 10.27 | 22.73 |
| HORVU4Hr1G077780.1 | Barley | peroxisome | 23.52 | 22.59 |
| HORVU5Hr1G079580.1 | Barley | mitochondrion | 22.37 | 22.48 |
| HORVU5Hr1G077720.1 | Barley | mitochondrion | 22.37 | 22.48 |
| HORVU5Hr1G084810.1 | Barley | cytosol | 21.92 | 22.38 |
| HORVU5Hr1G084820.2 | Barley | cytosol | 22.15 | 22.35 |
| HORVU5Hr1G084980.1 | Barley | cytosol | 23.52 | 22.2 |
| HORVU5Hr1G044390.1 | Barley | cytosol, peroxisome, plastid | 22.6 | 22.15 |
| HORVU7Hr1G030410.3 | Barley | peroxisome | 23.06 | 21.86 |
| HORVU1Hr1G019380.2 | Barley | cytosol, mitochondrion, plasma membrane | 23.06 | 21.77 |
| HORVU6Hr1G073010.3 | Barley | cytosol | 21.23 | 21.04 |
| HORVU3Hr1G027720.1 | Barley | cytosol | 5.25 | 18.4 |
| HORVU2Hr1G002500.2 | Barley | cytosol | 20.55 | 16.04 |
| HORVU2Hr1G124070.1 | Barley | cytosol | 6.16 | 9.0 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G012740.1 | EnsemblPlantsGene:HORVU6Hr1G012740 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | SUPFAM:SSF52777 | UniParc:UPI000B47D099 | UniProt:A0A287TCQ7 | MapMan:50.2.3 | : |
Description
No Description!
Coordinates
chrchr6H:-:25144161..25146124
Molecular Weight (calculated)
48291.5 Da
IEP (calculated)
8.301
GRAVY (calculated)
0.074
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEEEVQVV ESCLVTPSAD TPRNALQLSQ IDLMLANVGY TPLLHFYRQR HAATDDFFDV TRLKTALGKT LVAFYPMAGR FRVAADGRLE IDCNGKGMLF
101: LVAHSCLTVD DFSDFKPSPK LRRLFVPHVD DSANLLCATQ VTFFKCGGVA LGTVTHHAAM DGTAAFHFFQ TWSAFSRDGD RAVVNHPCHD RTLLCARDPP
201: VVHPDALSIF FPKINLSMPS GVNEVEIFTL SKAQLYTLKS ICGGRGVSTF SAVSAHMGQC MCLARRLPAD STTRIVFPAN FRRITVPPLP NSYFGNAMIR
301: VSVADEARRI ATGDLAYIAC RIRDTLGRVD DELVHSAINY LGQAKRDDGL LTAAGSLPVT DMRVVSWLGM PLYDVDFRWG KPLAMLLAES NRRGYVHLIG
401: SGQGDGSVRI VMCTEAAILQ EFKRLFYAKV KSMVYSKF
101: LVAHSCLTVD DFSDFKPSPK LRRLFVPHVD DSANLLCATQ VTFFKCGGVA LGTVTHHAAM DGTAAFHFFQ TWSAFSRDGD RAVVNHPCHD RTLLCARDPP
201: VVHPDALSIF FPKINLSMPS GVNEVEIFTL SKAQLYTLKS ICGGRGVSTF SAVSAHMGQC MCLARRLPAD STTRIVFPAN FRRITVPPLP NSYFGNAMIR
301: VSVADEARRI ATGDLAYIAC RIRDTLGRVD DELVHSAINY LGQAKRDDGL LTAAGSLPVT DMRVVSWLGM PLYDVDFRWG KPLAMLLAES NRRGYVHLIG
401: SGQGDGSVRI VMCTEAAILQ EFKRLFYAKV KSMVYSKF
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.