Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 1
  • plastid 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G525000.1 Wheat mitochondrion 88.45 76.24
TraesCS3B01G002000.1 Wheat mitochondrion 86.88 75.92
TraesCS1D01G021600.1 Wheat mitochondrion 87.66 75.74
TraesCS3A01G517500.1 Wheat mitochondrion 88.45 75.56
HORVU6Hr1G056230.2 Barley cytosol 71.92 62.13
TraesCS1B01G005300.1 Wheat mitochondrion 64.3 61.56
GSMUA_Achr4P01990_001 Banana mitochondrion 62.47 54.59
KRH09635 Soybean cytosol 52.76 53.74
KRH44584 Soybean cytosol 58.27 51.75
Bra036480.1-P Field mustard cytosol, peroxisome, plastid 57.48 51.65
PGSC0003DMT400036695 Potato cytosol 57.74 51.64
AT5G48930.1 Thale cress cytosol 58.01 51.04
CDY31956 Canola cytosol 57.74 50.81
CDY05770 Canola cytosol 57.74 50.81
Solyc03g117600.2.1 Tomato cytosol, extracellular 57.48 50.34
VIT_09s0018g01190.t01 Wine grape cytosol 56.43 50.12
KRH23680 Soybean cytosol, nucleus 57.48 49.89
HORVU2Hr1G086380.1 Barley cytosol, nucleus, plastid 75.85 49.66
CDY44162 Canola plastid 54.59 48.6
Bra033526.1-P Field mustard mitochondrion 54.33 48.36
CDY22880 Canola mitochondrion 54.33 48.36
KRH47315 Soybean endoplasmic reticulum 58.01 47.53
HORVU7Hr1G030670.1 Barley mitochondrion 38.32 31.67
HORVU5Hr1G064280.1 Barley plastid 35.96 31.28
HORVU3Hr1G027720.1 Barley cytosol 10.24 31.2
HORVU7Hr1G118090.1 Barley cytosol 34.91 30.37
HORVU2Hr1G109590.1 Barley cytosol 25.72 30.34
HORVU7Hr1G030780.1 Barley cytosol 33.6 29.77
HORVU6Hr1G088530.1 Barley cytosol 12.86 29.7
HORVU7Hr1G030740.3 Barley cytosol 33.33 29.33
HORVU5Hr1G108900.1 Barley peroxisome 34.12 28.95
HORVU3Hr1G097120.2 Barley cytosol, plasma membrane 32.55 27.93
HORVU2Hr1G109430.2 Barley cytosol 31.76 27.63
HORVU6Hr1G066420.1 Barley cytosol, peroxisome, plastid 32.55 27.43
HORVU0Hr1G023570.1 Barley cytosol, peroxisome, plastid 32.55 27.25
HORVU6Hr1G012740.1 Barley peroxisome 30.45 26.48
HORVU5Hr1G084810.1 Barley cytosol 29.66 26.34
HORVU6Hr1G088480.1 Barley extracellular, plasma membrane 32.28 26.11
HORVU6Hr1G081260.1 Barley peroxisome 32.55 26.11
HORVU5Hr1G079580.1 Barley mitochondrion 29.66 25.92
HORVU5Hr1G077720.1 Barley mitochondrion 29.66 25.92
HORVU5Hr1G084820.2 Barley cytosol 29.13 25.58
HORVU4Hr1G004050.1 Barley cytosol 29.4 25.23
HORVU4Hr1G077720.7 Barley cytosol, extracellular, peroxisome 27.82 24.59
HORVU4Hr1G077790.1 Barley endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 28.08 23.94
HORVU4Hr1G077780.1 Barley peroxisome 28.35 23.68
HORVU2Hr1G125370.1 Barley cytosol 26.25 23.42
HORVU2Hr1G112120.3 Barley mitochondrion 15.22 23.39
HORVU2Hr1G125270.1 Barley peroxisome 26.51 22.95
HORVU5Hr1G084980.1 Barley cytosol 27.56 22.63
HORVU7Hr1G030410.3 Barley peroxisome 27.3 22.51
HORVU1Hr1G019380.2 Barley cytosol, mitochondrion, plasma membrane 27.03 22.2
HORVU6Hr1G073010.3 Barley cytosol 25.46 21.95
HORVU5Hr1G044390.1 Barley cytosol, peroxisome, plastid 25.72 21.92
HORVU2Hr1G109470.1 Barley cytosol 10.24 19.7
HORVU2Hr1G002500.2 Barley cytosol 27.03 18.36
HORVU2Hr1G124070.1 Barley cytosol 11.55 14.67
Protein Annotations
EnsemblPlants:HORVU1Hr1G081430.3EnsemblPlantsGene:HORVU1Hr1G081430Gene3D:3.30.559.10GO:GO:0003674GO:GO:0003824GO:GO:0016740
GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:TransferasePANTHER:PTHR31642PANTHER:PTHR31642:SF116
PFAM:PF02458UniParc:UPI000B460B0CUniProt:A0A287GH26MapMan:50.2.3::
Description
No Description!
Coordinates
chrchr1H:-:527738153..527747362
Molecular Weight (calculated)
41809.5 Da
IEP (calculated)
7.295
GRAVY (calculated)
-0.034
Length
381 amino acids
Sequence
(BLAST)
001: MRQALAEALV TFNPMAGRLA RDKDGRVEID CNGEGVLFVE ADAPDATVAD YGDFAPTMEL KRLIPAIDYT QEISSFPVVL LQVTYFKCGG VSLGVAIQHH
101: VADGMSGLHF INSWSDLCRR AKIAVMPFID RTLIRPRKPP SPCYPHVEYH PSPAMVSSIP QDLSSKGTSP ASAVDIFKLT SNDIGRLRSQ LPKGHDLPRF
201: STYTLISAHV WRCVSLARGL PSEQPTKLYC AIDGRKRLNP PLPEGFLGNV LFTATPIVEA GKVVGGLADA AKIIQRELDR MDDDYCRSAL DYLELQPDLS
301: PLVRGAHTYR CPNLGITSWV NLPVHNADFG WGRPVFMGPG GVAFEGLAYI LPSVHNDGSL SIAISLQVDH MKNFRKLIFQ L
Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.