CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31956	Canola	cytosol	98.38	98.38
AT5G48930.1	Thale cress	cytosol	94.46	94.46
CDY44162	Canola	plastid	82.22	83.18
CDY22880	Canola	mitochondrion	81.99	82.94
VIT_09s0018g01190.t01	Wine grape	cytosol	78.75	79.49
Solyc03g117600.2.1	Tomato	cytosol, extracellular	78.52	78.16
KRH44584	Soybean	cytosol	77.37	78.09
PGSC0003DMT400036695	Potato	cytosol	76.44	77.7
KRH23680	Soybean	cytosol, nucleus	75.06	74.03
KRH47315	Soybean	endoplasmic reticulum	75.98	70.75
KRH09635	Soybean	cytosol	60.05	69.52
GSMUA_Achr5P04550_001	Banana	cytosol	66.97	69.21
GSMUA_Achr4P01990_001	Banana	mitochondrion	67.9	67.43
GSMUA_Achr10P...	Banana	mitochondrion	66.05	65.0
Os04t0500700-02	Rice	mitochondrion	66.05	64.71
Zm00001d017186_P001	Maize	extracellular	66.05	64.13
Zm00001d003129_P001	Maize	mitochondrion	21.71	63.95
TraesCS2D01G354300.1	Wheat	mitochondrion	64.67	63.93
Os02t0611800-01	Rice	plasma membrane	65.13	63.8
EES11073	Sorghum	mitochondrion	64.9	63.72
TraesCS2B01G374600.1	Wheat	mitochondrion	64.43	63.7
TraesCS6D01G203000.1	Wheat	cytosol	64.67	63.35
TraesCS6B01G249400.1	Wheat	cytosol, golgi	64.43	63.27
EES05411	Sorghum	cytosol	65.36	63.17
TraesCS6A01G232200.1	Wheat	cytosol	64.43	63.12
TraesCS2A01G354500.1	Wheat	mitochondrion	64.43	63.12
HORVU6Hr1G056230.2	Barley	cytosol	64.2	63.04
TraesCS1D01G021600.1	Wheat	mitochondrion	60.05	58.96
TraesCS3B01G002000.1	Wheat	mitochondrion	59.12	58.72
TraesCS3D01G525000.1	Wheat	mitochondrion	59.58	58.37
HORVU1Hr1G081430.3	Barley	cytosol, peroxisome, plastid	50.81	57.74
TraesCS3A01G517500.1	Wheat	mitochondrion	59.35	57.62
TraesCS1B01G005300.1	Wheat	mitochondrion	46.88	51.01
HORVU2Hr1G086380.1	Barley	cytosol, nucleus, plastid	64.43	47.94
CDX88645	Canola	cytosol, golgi, nucleus	43.19	42.02
CDX88644	Canola	cytosol	41.57	40.54
CDY56515	Canola	cytosol	33.49	38.16
CDY62143	Canola	cytosol	33.49	38.16
CDY66506	Canola	cytosol	37.88	37.1
CDY03367	Canola	cytosol	36.72	35.26
CDY11845	Canola	cytosol	39.72	18.09

Protein Annotations

EnsemblPlants:CDY05770	EnsemblPlantsGene:GSBRNA2T00120839001	Gene3D:3.30.559.10	GO:A0A078EUP6	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF116	PFAM:PF02458	ProteinID:CDY05770	ProteinID:CDY05770.1	UniParc:UPI0004EDAEF6	MapMan:21.6.1.1

Description

BnaC07g00330D

Coordinates

chrLK031964:-:748981..750435

Molecular Weight (calculated)

47934.4 Da

IEP (calculated)

6.134

GRAVY (calculated)

-0.127

Length

433 amino acids

Sequence
(BLAST)

001: MKINIRDSTM VRPAAETPST YLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL AKALVPFYPM AGRLKRDDDG RIEIDCNAAG VLFVVADTPS
101: VIDDFGDFAP TLELRQLIPE VDHSPGIHSF PLLVLQVTYF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFDH
201: VEYQPAPSMK IPLDPSKSSP DSTTVSIFKL SRDQLVSLKA KAKEDGNTVS YSSYEMLAGH VWRSVGKSRG LPDDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW FAAGLIHDVL ARMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQT EHMKLFEKYL YEI

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.