Factsheet for TraesCS1D01G021600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G081430.3	Barley	cytosol, peroxisome, plastid	75.74	87.66
TraesCS3D01G525000.1	Wheat	mitochondrion	84.13	83.94
TraesCS1B01G005300.1	Wheat	mitochondrion	67.8	75.13
TraesCS2D01G354300.1	Wheat	mitochondrion	74.38	74.89
TraesCS6D01G203000.1	Wheat	cytosol	70.07	69.91
GSMUA_Achr4P01990_001	Banana	mitochondrion	62.59	63.3
AT5G48930.1	Thale cress	cytosol	59.18	60.28
CDY05770	Canola	cytosol	58.96	60.05
CDY31956	Canola	cytosol	58.96	60.05
Bra036480.1-P	Field mustard	cytosol, peroxisome, plastid	57.6	59.91
KRH44584	Soybean	cytosol	58.05	59.67
PGSC0003DMT400036695	Potato	cytosol	57.6	59.62
Solyc03g117600.2.1	Tomato	cytosol, extracellular	58.73	59.54
VIT_09s0018g01190.t01	Wine grape	cytosol	56.92	58.51
KRH23680	Soybean	cytosol, nucleus	56.69	56.95
Bra033526.1-P	Field mustard	mitochondrion	54.88	56.54
CDY22880	Canola	mitochondrion	54.88	56.54
CDY44162	Canola	plastid	54.42	56.07
KRH47315	Soybean	endoplasmic reticulum	57.37	54.41
KRH09635	Soybean	cytosol	46.03	54.28
TraesCS3D01G441400.1	Wheat	cytosol, plasma membrane, plastid	18.59	38.32
TraesCS5D01G230700.1	Wheat	plastid	36.51	36.76
TraesCS7D01G524200.1	Wheat	cytosol	36.05	36.47
TraesCS5D01G230500.1	Wheat	cytosol	35.6	36.43
TraesCS5D01G462600.1	Wheat	peroxisome	36.51	35.86
TraesCS3D01G514600.1	Wheat	peroxisome	35.83	35.43
TraesCS3D01G492400.1	Wheat	cytosol	34.92	35.32
TraesCS7D01G151800.1	Wheat	cytosol	34.47	35.27
TraesCS7D01G151400.1	Wheat	cytosol	34.24	35.12
TraesCS7D01G151900.1	Wheat	cytosol	34.01	34.97
TraesCS7D01G436700.1	Wheat	peroxisome	33.56	34.66
TraesCS6D01G241700.1	Wheat	cytosol	34.24	34.47
TraesCS7D01G015400.1	Wheat	peroxisome	34.24	33.93
TraesCS6D01G025800.1	Wheat	peroxisome	33.11	33.33
TraesCS3D01G314900.1	Wheat	peroxisome	32.65	32.65
TraesCS2D01G490400.1	Wheat	cytosol	29.93	29.93
TraesCS2D01G491100.1	Wheat	cytosol	29.71	29.71
TraesCS2D01G490900.1	Wheat	cytosol	29.71	29.71
TraesCS4D01G024500.1	Wheat	cytosol	28.8	28.41
TraesCS6D01G359800.1	Wheat	peroxisome	28.12	28.18
TraesCS2D01G568200.1	Wheat	mitochondrion	26.76	27.44
TraesCS2D01G581500.1	Wheat	cytosol	26.98	27.11
TraesCS5D01G342400.1	Wheat	cytosol, golgi, plastid	26.53	26.96
TraesCS4D01G300400.1	Wheat	cytosol, extracellular, peroxisome	26.3	26.91
TraesCS5D01G310800.1	Wheat	cytosol	26.53	26.83
TraesCS5D01G342100.1	Wheat	cytosol	26.3	26.73
TraesCS5D01G342300.1	Wheat	cytosol	26.3	26.73
TraesCS4D01G300500.1	Wheat	peroxisome	26.98	26.39
TraesCS2D01G582000.1	Wheat	cytosol	26.08	26.14
TraesCS4D01G300800.1	Wheat	cytosol, extracellular, peroxisome	25.62	25.68
TraesCS4D01G359800.1	Wheat	cytosol	24.94	25.52
TraesCS5D01G342800.1	Wheat	cytosol	25.4	25.51
TraesCS5D01G342700.1	Wheat	cytosol	25.4	25.4
TraesCS2D01G016600.1	Wheat	cytosol	26.76	25.27
TraesCS1D01G089900.1	Wheat	cytosol	24.94	25.11
TraesCS3D01G545300.1	Wheat	cytosol	25.62	25.06
TraesCS1D01G089600.1	Wheat	cytosol	24.72	24.89
TraesCS6D01G273300.1	Wheat	cytosol	24.26	24.15
TraesCS5D01G154500.1	Wheat	plastid	23.13	22.67

Protein Annotations

EnsemblPlants:TraesCS1D01G021600.1	EnsemblPlantsGene:TraesCS1D01G021600	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF116
PFAM:PF02458	MapMan:21.6.1.1	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:9271990..9276680

Molecular Weight (calculated)

49000.2 Da

IEP (calculated)

6.370

GRAVY (calculated)

-0.029

Length

441 amino acids

Sequence
(BLAST)

001: MMAIMVRQST MVRPARETMP TRLWNSHLDL LVPRFHTPSV YFYRRPEGAA ATEGFFDGER MRQALAEALV TFYPMAGRLA RDKDGRVEID CNGEGVLFVE
101: ADAPDTTVAD YGDFAPTMEL NRLIPAIDYT QEISSFPLVV LQVTYFKCGG VSLGVATQHH LADGMSGLHF INSWSDICRG AKIAVMPFIN RTLVRARDPP
201: TPCYPHVEYH PSPAMLSSIP QDLSSVQTLP TTTVDIFQLT RSDICRLRSQ LPKAHDMPRF STYTLLSAHV WRCVSLARGL PSEQPTKLYC AIDGRKRLNP
301: PLPEGFLGNV LFTATPILEA GKVVCGLADA AKIIQMELDR VDNDYCRSAL DYLELQPDLS ALVRGAQTYH CPNLGITSWV NLPIHNADFG WGQPVFMGPG
401: GIAFEGLAYV LPSVQNDGSL YIAISLEADH MKKFRNLIFE L

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.