Factsheet for TraesCS5D01G230700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G222000.1	Wheat	plastid	96.58	96.58
HORVU5Hr1G064280.1	Barley	plastid	94.29	94.29
TraesCS5A01G222900.1	Wheat	cytosol	66.44	90.94
EER98918	Sorghum	cytosol, peroxisome, plastid	79.68	77.04
Zm00001d020528_P001	Maize	cytosol	75.8	74.77
TraesCS7D01G151400.1	Wheat	cytosol	55.02	56.05
TraesCS7D01G151800.1	Wheat	cytosol	54.34	55.22
TraesCS7D01G151900.1	Wheat	cytosol	52.28	53.38
TraesCS3D01G314900.1	Wheat	peroxisome	51.37	51.02
TraesCS5D01G230500.1	Wheat	cytosol	45.89	46.64
TraesCS7D01G524200.1	Wheat	cytosol	45.43	45.64
TraesCS3D01G441400.1	Wheat	cytosol, plasma membrane, plastid	21.46	43.93
TraesCS3D01G492400.1	Wheat	cytosol	42.69	42.89
TraesCS7D01G436700.1	Wheat	peroxisome	40.41	41.45
TraesCS3D01G514600.1	Wheat	peroxisome	42.01	41.26
TraesCS5D01G462600.1	Wheat	peroxisome	42.01	40.98
TraesCS6D01G241700.1	Wheat	cytosol	40.87	40.87
TraesCS7D01G015400.1	Wheat	peroxisome	40.64	40.0
TraesCS6D01G203000.1	Wheat	cytosol	39.95	39.59
TraesCS2D01G354300.1	Wheat	mitochondrion	39.04	39.04
TraesCS6D01G025800.1	Wheat	peroxisome	38.13	38.13
TraesCS3D01G525000.1	Wheat	mitochondrion	37.21	36.88
TraesCS1D01G021600.1	Wheat	mitochondrion	36.76	36.51
TraesCS6D01G359800.1	Wheat	peroxisome	29.91	29.77
TraesCS2D01G490400.1	Wheat	cytosol	29.68	29.48
TraesCS5D01G342300.1	Wheat	cytosol	28.08	28.34
TraesCS5D01G342100.1	Wheat	cytosol	27.85	28.11
TraesCS5D01G342400.1	Wheat	cytosol, golgi, plastid	27.85	28.11
TraesCS2D01G490900.1	Wheat	cytosol	28.08	27.89
TraesCS2D01G491100.1	Wheat	cytosol	28.08	27.89
TraesCS4D01G300400.1	Wheat	cytosol, extracellular, peroxisome	27.4	27.84
TraesCS5D01G310800.1	Wheat	cytosol	27.63	27.75
TraesCS2D01G568200.1	Wheat	mitochondrion	27.17	27.67
TraesCS5D01G342700.1	Wheat	cytosol	27.85	27.66
TraesCS4D01G024500.1	Wheat	cytosol	28.08	27.52
TraesCS4D01G300500.1	Wheat	peroxisome	28.31	27.49
TraesCS1D01G089600.1	Wheat	cytosol	27.17	27.17
TraesCS1D01G089900.1	Wheat	cytosol	26.94	26.94
TraesCS4D01G300800.1	Wheat	cytosol, extracellular, peroxisome	26.94	26.82
TraesCS5D01G154500.1	Wheat	plastid	27.4	26.67
TraesCS5D01G342800.1	Wheat	cytosol	26.71	26.65
TraesCS2D01G016600.1	Wheat	cytosol	28.31	26.55
TraesCS4D01G359800.1	Wheat	cytosol	26.03	26.45
TraesCS2D01G582000.1	Wheat	cytosol	26.48	26.36
TraesCS2D01G581500.1	Wheat	cytosol	26.26	26.2
TraesCS6D01G273300.1	Wheat	cytosol	25.8	25.51
TraesCS3D01G545300.1	Wheat	cytosol	25.34	24.61

Protein Annotations

EnsemblPlants:TraesCS5D01G230700.1	EnsemblPlantsGene:TraesCS5D01G230700	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF23
PFAM:PF02458	SEG:seg	MapMan:50.2.3	:	:	:

Description

No Description!

Coordinates

chr5D:+:337698189..337699873

Molecular Weight (calculated)

46808.0 Da

IEP (calculated)

8.465

GRAVY (calculated)

0.007

Length

438 amino acids

Sequence
(BLAST)

001: MAVQVVTSEL VAPSEATPRR ALWLSNLDLG ARNGYSPTVY FFRAPHRGDG KAESFFSAGV LRAGLARALV PFHPFAGRLG AGRGGRAEID CNDQGALFVV
101: ARSEAALDDF QGFAPSKEMR DMFVPPYDNA GAGAPLLMLQ VTFFRCGGVA LGTAMHHFVI DGRSAFHFIQ TWASIARGDA SATVPPSLDR TPLRARSPPA
201: VHFDHSREYR LTTPASTDPP AAGGVKPSSE YASAILRVTG AQAAALRARA GAPRVSTFRA LVAHVWRCAC AARSLAPDAE SRLYTMIDMR ARLSPPLLDA
301: YFGNAVVRTS VSARVGDLLS GPLGFGARRL RAATGQGDEY ARSVVDYLET ADMGALPRSG LPGTDLRVIS WMGMPSHDAD FGWGEPAFLA PALMFYPGFV
401: YLMSCPGKGG DVAVAVSLEP DRMARFKELF SEEMAAME

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.