Factsheet for TraesCS5D01G230500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G222700.1	Wheat	cytosol	98.84	97.93
TraesCS5B01G221700.1	Wheat	cytosol	97.91	97.23
Os09t0422000-01	Rice	plasma membrane	87.47	85.68
Zm00001d020530_P001	Maize	cytosol, extracellular	83.06	82.49
EER98920	Sorghum	cytosol	81.9	81.52
TraesCS7D01G524200.1	Wheat	cytosol	75.41	74.54
TraesCS5D01G230700.1	Wheat	plastid	46.64	45.89
TraesCS3D01G492400.1	Wheat	cytosol	46.4	45.87
TraesCS3D01G441400.1	Wheat	cytosol, plasma membrane, plastid	22.51	45.33
TraesCS3D01G514600.1	Wheat	peroxisome	46.64	45.07
TraesCS7D01G436700.1	Wheat	peroxisome	44.55	44.96
TraesCS5D01G462600.1	Wheat	peroxisome	46.17	44.32
TraesCS6D01G241700.1	Wheat	cytosol	42.0	41.32
TraesCS6D01G025800.1	Wheat	peroxisome	41.3	40.64
TraesCS7D01G151900.1	Wheat	cytosol	39.44	39.63
TraesCS7D01G015400.1	Wheat	peroxisome	40.84	39.55
TraesCS6D01G203000.1	Wheat	cytosol	40.37	39.37
TraesCS7D01G151400.1	Wheat	cytosol	38.98	39.07
TraesCS7D01G151800.1	Wheat	cytosol	38.98	38.98
TraesCS2D01G354300.1	Wheat	mitochondrion	38.52	37.9
TraesCS3D01G314900.1	Wheat	peroxisome	38.75	37.87
TraesCS1D01G021600.1	Wheat	mitochondrion	36.43	35.6
TraesCS3D01G525000.1	Wheat	mitochondrion	36.19	35.29
TraesCS4D01G024500.1	Wheat	cytosol	29.93	28.86
TraesCS6D01G359800.1	Wheat	peroxisome	29.0	28.41
TraesCS5D01G342700.1	Wheat	cytosol	28.77	28.12
TraesCS5D01G342800.1	Wheat	cytosol	28.31	27.79
TraesCS2D01G491100.1	Wheat	cytosol	28.07	27.44
TraesCS5D01G342400.1	Wheat	cytosol, golgi, plastid	27.61	27.42
TraesCS5D01G342300.1	Wheat	cytosol	27.61	27.42
TraesCS5D01G342100.1	Wheat	cytosol	27.61	27.42
TraesCS4D01G300400.1	Wheat	cytosol, extracellular, peroxisome	27.38	27.38
TraesCS2D01G490900.1	Wheat	cytosol	27.84	27.21
TraesCS2D01G490400.1	Wheat	cytosol	27.84	27.21
TraesCS2D01G581500.1	Wheat	cytosol	27.15	26.65
TraesCS2D01G582000.1	Wheat	cytosol	27.15	26.59
TraesCS1D01G089900.1	Wheat	cytosol	26.68	26.26
TraesCS1D01G089600.1	Wheat	cytosol	26.68	26.26
TraesCS3D01G545300.1	Wheat	cytosol	27.38	26.16
TraesCS2D01G568200.1	Wheat	mitochondrion	25.99	26.05
TraesCS5D01G310800.1	Wheat	cytosol	26.22	25.92
TraesCS4D01G300800.1	Wheat	cytosol, extracellular, peroxisome	26.45	25.91
TraesCS4D01G359800.1	Wheat	cytosol	25.52	25.52
TraesCS2D01G016600.1	Wheat	cytosol	26.68	24.63
TraesCS6D01G273300.1	Wheat	cytosol	25.29	24.61
TraesCS4D01G300500.1	Wheat	peroxisome	25.52	24.39
TraesCS5D01G154500.1	Wheat	plastid	23.9	22.89

Protein Annotations

EnsemblPlants:TraesCS5D01G230500.1	EnsemblPlantsGene:TraesCS5D01G230500	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF33
PFAM:PF02458	SEG:seg	MapMan:50.2.3	:	:	:

Description

No Description!

Coordinates

chr5D:+:337525315..337529473

Molecular Weight (calculated)

47051.5 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.042

Length

431 amino acids

Sequence
(BLAST)

001: MKVEVVDTTL VTPSEPTPRH TLWLSNLDLA VPKTHTPLVY YYPAPPAGDG GEKQEEFFAP ERLREALARA LVPFYPLAGR MATGPEGRLE IDCNGEGALF
101: VVARADFTGD EMFRDFEPSP EARRLLVPFA ASGDPPCLLA MVQVTFLKCG GVAVGTGMHH VTMDGAGAIQ FIRTWTTLAR GLDAASVHPS PPVHDRTVLR
201: ARSPPHATFE HPVYSPSNLN GLPRPFVTRV YAVSPKLLAG IKSSCAPGVS TYCALTAHLW RAMCVARGLA PDAESRLRVP ANIRQRLRPQ LPANYFGNAI
301: VRDLVTVRVG DVLSQPLGFV AERIKRAVAR VDDAFVRSVI DYLEVESEKG SQAARGQFMP ETDLWVVSWL GMPIHDADFG WGCPKFVAPA QMFGSGTAYV
401: TQAPDKDDGV SVLFALEPEY LQCFEKAFYG E

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.