Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G537300.1 | Wheat | cytosol | 94.95 | 95.17 |
| TraesCS7B01G455100.1 | Wheat | cytosol | 93.12 | 93.98 |
| HORVU7Hr1G118090.1 | Barley | cytosol | 94.27 | 93.84 |
| Zm00001d032148_P001 | Maize | cytosol | 81.88 | 82.83 |
| EES15064 | Sorghum | cytosol | 82.34 | 81.04 |
| TraesCS5D01G230500.1 | Wheat | cytosol | 74.54 | 75.41 |
| EES15065 | Sorghum | cytosol, peroxisome, plastid | 69.5 | 67.94 |
| Zm00001d050455_P001 | Maize | plastid | 69.04 | 63.64 |
| Zm00001d041341_P001 | Maize | cytosol | 46.56 | 50.62 |
| TraesCS3D01G441400.1 | Wheat | cytosol, plasma membrane, plastid | 22.48 | 45.79 |
| TraesCS3D01G514600.1 | Wheat | peroxisome | 46.79 | 45.74 |
| TraesCS5D01G462600.1 | Wheat | peroxisome | 47.02 | 45.66 |
| TraesCS5D01G230700.1 | Wheat | plastid | 45.64 | 45.43 |
| TraesCS7D01G436700.1 | Wheat | peroxisome | 44.5 | 45.43 |
| TraesCS3D01G492400.1 | Wheat | cytosol | 45.41 | 45.41 |
| TraesCS6D01G241700.1 | Wheat | cytosol | 43.58 | 43.38 |
| TraesCS7D01G151400.1 | Wheat | cytosol | 41.97 | 42.56 |
| TraesCS7D01G151800.1 | Wheat | cytosol | 41.51 | 42.0 |
| TraesCS7D01G015400.1 | Wheat | peroxisome | 42.43 | 41.57 |
| TraesCS6D01G025800.1 | Wheat | peroxisome | 41.28 | 41.1 |
| TraesCS7D01G151900.1 | Wheat | cytosol | 40.14 | 40.79 |
| TraesCS3D01G314900.1 | Wheat | peroxisome | 39.45 | 39.0 |
| TraesCS6D01G203000.1 | Wheat | cytosol | 38.99 | 38.46 |
| TraesCS2D01G354300.1 | Wheat | mitochondrion | 38.07 | 37.9 |
| TraesCS1D01G021600.1 | Wheat | mitochondrion | 36.47 | 36.05 |
| TraesCS3D01G525000.1 | Wheat | mitochondrion | 36.01 | 35.52 |
| TraesCS4D01G024500.1 | Wheat | cytosol | 29.59 | 28.86 |
| TraesCS4D01G300400.1 | Wheat | cytosol, extracellular, peroxisome | 27.98 | 28.31 |
| TraesCS4D01G359800.1 | Wheat | cytosol | 27.75 | 28.07 |
| TraesCS6D01G359800.1 | Wheat | peroxisome | 28.21 | 27.95 |
| TraesCS1D01G089900.1 | Wheat | cytosol | 27.98 | 27.85 |
| TraesCS1D01G089600.1 | Wheat | cytosol | 27.98 | 27.85 |
| TraesCS2D01G491100.1 | Wheat | cytosol | 27.98 | 27.66 |
| TraesCS5D01G342100.1 | Wheat | cytosol | 27.52 | 27.65 |
| TraesCS2D01G582000.1 | Wheat | cytosol | 27.52 | 27.27 |
| TraesCS2D01G490400.1 | Wheat | cytosol | 27.52 | 27.21 |
| TraesCS2D01G568200.1 | Wheat | mitochondrion | 26.83 | 27.21 |
| TraesCS2D01G581500.1 | Wheat | cytosol | 27.29 | 27.11 |
| TraesCS4D01G300800.1 | Wheat | cytosol, extracellular, peroxisome | 27.29 | 27.05 |
| TraesCS5D01G342700.1 | Wheat | cytosol | 27.29 | 26.98 |
| TraesCS2D01G490900.1 | Wheat | cytosol | 27.29 | 26.98 |
| TraesCS5D01G342400.1 | Wheat | cytosol, golgi, plastid | 26.83 | 26.96 |
| TraesCS5D01G342300.1 | Wheat | cytosol | 26.83 | 26.96 |
| TraesCS5D01G342800.1 | Wheat | cytosol | 26.83 | 26.65 |
| TraesCS5D01G310800.1 | Wheat | cytosol | 26.15 | 26.15 |
| TraesCS4D01G300500.1 | Wheat | peroxisome | 26.38 | 25.5 |
| TraesCS3D01G545300.1 | Wheat | cytosol | 26.15 | 25.28 |
| TraesCS6D01G273300.1 | Wheat | cytosol | 24.54 | 24.15 |
| TraesCS5D01G154500.1 | Wheat | plastid | 24.77 | 24.0 |
| TraesCS2D01G016600.1 | Wheat | cytosol | 25.46 | 23.77 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G524200.1 | EnsemblPlantsGene:TraesCS7D01G524200 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF25 |
| PFAM:PF02458 | SEG:seg | SUPFAM:SSF52777 | MapMan:50.2.3 | : | : |
Description
No Description!
Coordinates
chr7D:+:620248438..620252740
Molecular Weight (calculated)
47789.3 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.068
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKVEVVEST LVAPSEETPR RALWLSNLDL AVPKTHTPLV YYYPAPATAA PDTDSADFFS PERLKAALAK ALVLFYPLAG RLGREGEGGR LQIDCNGEGA
101: LFVLARAPDV AGEDLFGSGY EPSPEIRRMF VPFAPSGDPP CHMAMFQVTF LKCGGVVLGT GIHHVTMDGM GAFHFIQTWT GLARGLSLSE ACPSPPFHDR
201: TLLRARSPPR PEFEHPVYSP AYLNGAPRPF VTRVYSVSQK LLADIKSRCA PGVSTYGAVT AHLWRCMCVA RGLAPGSDTR LRVPANIRHR LRPQLPRQFF
301: GNAIVRDLVT VKVGDVLSQP LGYVADTIRK AVDHVDDAYT RSVIDYLEVE SEKGSQAARG QLMPESDLWV VSWLGMPMYD ADFGWGAPRF VAPAQMFGSG
401: TAYVTQRGAD RDDGIAVLFA LEPEYLQCFQ DVFYGE
101: LFVLARAPDV AGEDLFGSGY EPSPEIRRMF VPFAPSGDPP CHMAMFQVTF LKCGGVVLGT GIHHVTMDGM GAFHFIQTWT GLARGLSLSE ACPSPPFHDR
201: TLLRARSPPR PEFEHPVYSP AYLNGAPRPF VTRVYSVSQK LLADIKSRCA PGVSTYGAVT AHLWRCMCVA RGLAPGSDTR LRVPANIRHR LRPQLPRQFF
301: GNAIVRDLVT VKVGDVLSQP LGYVADTIRK AVDHVDDAYT RSVIDYLEVE SEKGSQAARG QLMPESDLWV VSWLGMPMYD ADFGWGAPRF VAPAQMFGSG
401: TAYVTQRGAD RDDGIAVLFA LEPEYLQCFQ DVFYGE
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.