Factsheet for Zm00001d041341_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G537300.1	Wheat	cytosol	51.37	47.36
HORVU7Hr1G118090.1	Barley	cytosol	51.12	46.8
TraesCS7D01G524200.1	Wheat	cytosol	50.62	46.56
TraesCS7B01G455100.1	Wheat	cytosol	50.12	46.53
Zm00001d032148_P001	Maize	cytosol	49.38	45.94
Zm00001d020530_P001	Maize	cytosol, extracellular	46.88	43.32
Zm00001d050455_P001	Maize	plastid	47.38	40.17
Zm00001d003129_P001	Maize	mitochondrion	13.72	37.41
Zm00001d039956_P001	Maize	peroxisome	38.65	35.71
Zm00001d039837_P002	Maize	peroxisome	36.66	34.43
Zm00001d039952_P002	Maize	peroxisome	35.91	33.1
Zm00001d039947_P002	Maize	plasma membrane	37.66	32.4
Zm00001d039840_P001	Maize	peroxisome	35.16	32.27
Zm00001d045091_P001	Maize	cytosol	34.66	32.1
Zm00001d039833_P001	Maize	cytosol	34.91	31.32
Zm00001d020528_P001	Maize	cytosol	34.66	31.31
Zm00001d018367_P001	Maize	cytosol	34.16	31.0
Zm00001d005607_P001	Maize	cytosol	33.92	30.98
Zm00001d037073_P001	Maize	cytosol	33.42	30.59
Zm00001d045092_P001	Maize	cytosol	33.42	30.45
Zm00001d039951_P001	Maize	nucleus	21.2	27.69
Zm00001d017186_P001	Maize	extracellular	30.67	27.58
Zm00001d048870_P001	Maize	peroxisome	24.19	21.32
Zm00001d027948_P001	Maize	cytosol	23.44	21.22
Zm00001d027946_P001	Maize	cytosol	23.19	20.99
Zm00001d021329_P001	Maize	cytosol	23.44	20.94
Zm00001d033521_P001	Maize	cytosol	23.69	20.93
Zm00001d021324_P001	Maize	cytosol	22.69	20.5
Zm00001d006263_P001	Maize	cytosol	22.69	20.45
Zm00001d006260_P001	Maize	cytosol	20.7	20.44
Zm00001d007606_P001	Maize	peroxisome	23.44	20.13
Zm00001d030542_P001	Maize	plastid	21.7	19.73
Zm00001d048871_P001	Maize	peroxisome	22.69	19.61
Zm00001d048872_P001	Maize	cytosol	22.44	19.48
Zm00001d022592_P001	Maize	cytosol	21.45	19.33
Zm00001d052449_P001	Maize	cytosol, peroxisome, plastid	21.7	19.08
Zm00001d003856_P001	Maize	cytosol	20.7	18.53
Zm00001d030540_P001	Maize	plastid	10.47	15.38

Protein Annotations

EnsemblPlants:Zm00001d041341_P001	EnsemblPlants:Zm00001d041341_T001	EnsemblPlantsGene:Zm00001d041341	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF25	PFAM:PF02458	ProteinID:ONM32834.1	SUPFAM:SSF52777	UniParc:UPI000844CCDC	UniProt:A0A1D6MVJ8
MapMan:50.2.3	:	:	:	:	:

Description

Spermidine hydroxycinnamoyl transferase

Coordinates

chr3:+:113167169..113168502

Molecular Weight (calculated)

43470.5 Da

IEP (calculated)

4.984

GRAVY (calculated)

0.111

Length

401 amino acids

Sequence
(BLAST)

001: MTKMEVVETA MVVTPSEEMR RQGLWLSNLD LQSPHIYTTV LNYYPAPAGR PEHGGGACDP ERLKVALARA LVPFYPLAGR LCLGEDGRRY VDCNGEGVRF
101: FVARADVTGP ELFKDYQPSP EVTETFVPDM PPEELPCMVA LFQLTFLKCG GVVLSSSFHH AVVDGTSLFH FMQSWSRLAR GLDAAEAVGP QAPFHDRTSL
201: RARAPPLQQM GAPPAPAAHS LNFAATSCPR AFVARVYPFP HTLVHELTSR CCGSGATGVS SFFGNAALQA PALPRRVGDV IDGPPASVVG MIMDAVNSVD
301: DTYVRAVVDY HELPKENLVL GAMEPPESDV AMVSWLGMPL YDADFGWGVP ELVMPTTVSV FSGMVLVLPR GLDKESGIIV VVNLEPEYLP ALKKLLYDVV
401: L

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.