Factsheet for Zm00001d048872_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G604000.1	Wheat	cytosol	72.08	75.17
TraesCSU01G244500.1	Wheat	cytosol	28.57	72.53
Zm00001d048871_P001	Maize	peroxisome	65.37	65.09
Zm00001d048870_P001	Maize	peroxisome	54.33	55.16
Zm00001d007606_P001	Maize	peroxisome	53.03	52.46
Zm00001d033521_P001	Maize	cytosol	48.48	49.34
PGSC0003DMT400001145	Potato	cytosol	44.37	46.49
GSMUA_Achr8P15170_001	Banana	cytosol	38.74	46.37
Solyc11g066640.1.1	Tomato	cytosol	43.94	46.24
GSMUA_Achr8P03170_001	Banana	cytosol	37.23	45.74
Solyc06g074710.1.1	Tomato	cytosol	43.72	45.5
PGSC0003DMT400018441	Potato	cytosol	43.72	45.39
Zm00001d021324_P001	Maize	cytosol	43.51	45.27
GSMUA_Achr8P03200_001	Banana	cytosol	33.55	44.93
Zm00001d022592_P001	Maize	cytosol	43.07	44.72
GSMUA_Achr8P03190_001	Banana	cytosol	33.33	44.38
GSMUA_Achr8P03210_001	Banana	cytosol	33.77	44.32
GSMUA_Achr8P03180_001	Banana	plastid	38.53	43.52
Zm00001d006263_P001	Maize	cytosol	41.77	43.37
Zm00001d021329_P001	Maize	cytosol	41.13	42.32
Solyc11g071470.1.1	Tomato	cytosol	40.48	42.21
Solyc11g071480.1.1	Tomato	cytoskeleton, cytosol, peroxisome	40.26	41.99
Zm00001d006260_P001	Maize	cytosol	35.93	40.89
Zm00001d003856_P001	Maize	cytosol	39.61	40.85
HORVU2Hr1G124070.1	Barley	cytosol	26.41	40.67
PGSC0003DMT400048126	Potato	cytosol	35.5	36.36
Zm00001d027948_P001	Maize	cytosol	34.85	36.34
Zm00001d030542_P001	Maize	plastid	34.42	36.05
Zm00001d027946_P001	Maize	cytosol	33.77	35.21
PGSC0003DMT400048130	Potato	cytoskeleton, cytosol, peroxisome	40.48	32.86
Zm00001d030540_P001	Maize	plastid	18.4	31.14
Zm00001d052449_P001	Maize	cytosol, peroxisome, plastid	29.65	30.04
Bra024450.1-P	Field mustard	cytosol	24.03	29.21
CDY56515	Canola	cytosol	24.03	29.21
CDY62143	Canola	cytosol	24.03	29.21
Zm00001d017186_P001	Maize	extracellular	27.71	28.7
Zm00001d018367_P001	Maize	cytosol	27.27	28.51
Zm00001d032148_P001	Maize	cytosol	25.76	27.61
Zm00001d045092_P001	Maize	cytosol	26.19	27.5
Zm00001d020530_P001	Maize	cytosol, extracellular	25.54	27.19
VIT_11s0103g00200.t01	Wine grape	cytosol	26.41	26.75
Zm00001d037073_P001	Maize	cytosol	25.32	26.71
AT2G19070.1	Thale cress	cytosol	25.97	26.61
CDY66506	Canola	cytosol	25.32	26.47
Zm00001d045091_P001	Maize	cytosol	24.46	26.1
KRH02826	Soybean	cytosol	25.54	25.93
Zm00001d020528_P001	Maize	cytosol	24.89	25.9
CDY03367	Canola	cytosol	25.11	25.72
Bra038561.1-P	Field mustard	cytosol	25.11	25.72
KRH02825	Soybean	cytosol	25.32	25.43
KRG89744	Soybean	cytosol	25.11	25.0
KRH46097	Soybean	cytosol	12.12	24.78
KRH46099	Soybean	cytosol, plastid	24.03	24.56
VIT_11s0037g00570.t01	Wine grape	mitochondrion	23.38	24.27
KRG98872	Soybean	cytosol, peroxisome, plastid	24.46	24.25
Zm00001d039837_P002	Maize	peroxisome	22.29	24.12
Zm00001d039840_P001	Maize	peroxisome	22.73	24.03
VIT_11s0037g00580.t01	Wine grape	mitochondrion	23.59	23.85
Zm00001d003129_P001	Maize	mitochondrion	7.58	23.81
Zm00001d050455_P001	Maize	plastid	24.24	23.68
KRH06686	Soybean	peroxisome	23.81	23.66
KRH53324	Soybean	cytosol	12.34	23.55
KRH06685	Soybean	plastid	23.38	23.53
Zm00001d039833_P001	Maize	cytosol	22.73	23.49
KRG98999	Soybean	mitochondrion, peroxisome, plastid	24.24	23.33
Zm00001d039956_P001	Maize	peroxisome	21.86	23.27
KRH08423	Soybean	cytosol	22.51	23.27
Zm00001d039952_P002	Maize	peroxisome	21.86	23.22
KRG98866	Soybean	cytosol	22.51	23.11
KRH32581	Soybean	cytosol	21.43	23.02
KRH32575	Soybean	cytosol	22.08	22.77
KRG98873	Soybean	mitochondrion	22.73	22.73
KRH46095	Soybean	plastid	23.38	22.69
KRG98867	Soybean	endoplasmic reticulum	22.08	22.52
Zm00001d041341_P001	Maize	cytosol	19.48	22.44
KRH46098	Soybean	cytosol	22.08	22.37
Zm00001d005607_P001	Maize	cytosol	20.78	21.87
KRH70082	Soybean	cytosol	12.77	21.85
KRH13469	Soybean	cytosol	21.43	21.57
KRH46094	Soybean	plastid	21.64	21.51
KRG98868	Soybean	cytosol	20.13	21.43
Zm00001d039947_P002	Maize	plasma membrane	21.43	21.24
KRH30198	Soybean	cytosol	21.43	20.58
KRH30196	Soybean	cytosol	21.43	20.58
Zm00001d039951_P001	Maize	nucleus	12.77	19.22

Protein Annotations

EnsemblPlants:Zm00001d048872_P001	EnsemblPlants:Zm00001d048872_T001	EnsemblPlantsGene:Zm00001d048872	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF44	PFAM:PF02458	ProteinID:AQK49078.1	SEG:seg	UniParc:UPI00022172D4	UniProt:K7TYX6
MapMan:50.2.3	:	:	:	:	:

Description

Spermidine hydroxycinnamoyl transferase

Coordinates

chr4:-:6787107..6788495

Molecular Weight (calculated)

50200.3 Da

IEP (calculated)

6.233

GRAVY (calculated)

-0.072

Length

462 amino acids

Sequence
(BLAST)

001: MEIIVHSSRS VKPNYGDRSD GGAVAASVEV VHLSVFDKIS YDEYITGVCA FHPPAPPNHI LEAGLATALA VYREWAGRLG MDGTGNRAIV LNDAGARYVE
101: ATADAELSSS VVLELTTGAN LLSLYPPSCD GAKELLLAQV TRFRCGSIIV GVSVHHRVAD GHAIWAFLFA WGQATRGVRI DDSIPVQQRH DRLSLFAPRD
201: PPQVKFDHRG NEFKPHVGDA SGGNGAAHAG DEVVIHRVHF SKEWIMELKS QSQAAASEGA AATARPYTTT LQCVAAHLWR CITAARGLDG NQTTRMRIAV
301: NGRSRMKDPR VPVGYTGNAV LWAWPTTTAR ELGRQHIRET VELISREVAR IDDAYFRSFI DFAGSGAVEK EQLVPTADSL ELTLSPNVEV DSLLGIPFYD
401: MDFGGARPFF FVPGYSTVPV DGFIYVLQSF EGDGSVDAYV PLFSTTIEAF KRCCYSLQPT AS

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.