Factsheet for Zm00001d039951_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039956_P001	Maize	peroxisome	78.83	55.76
KXG31953	Sorghum	cytosol, endoplasmic reticulum, peroxisome	71.99	50.92
Zm00001d039952_P002	Maize	peroxisome	71.34	50.34
Zm00001d039947_P002	Maize	plasma membrane	73.94	48.71
Os08t0205000-00	Rice	cytosol	25.73	47.31
KXG31952	Sorghum	cytosol	56.68	41.93
Zm00001d003129_P001	Maize	mitochondrion	19.87	41.5
Zm00001d039840_P001	Maize	peroxisome	58.31	40.96
Zm00001d039833_P001	Maize	cytosol	58.63	40.27
Zm00001d039837_P002	Maize	peroxisome	55.7	40.05
HORVU2Hr1G112120.3	Barley	mitochondrion	29.97	37.1
Zm00001d005607_P001	Maize	cytosol	52.44	36.67
Os08t0543400-02	Rice	cytosol, plasma membrane	49.51	34.39
TraesCS6D01G241700.1	Wheat	cytosol	45.93	32.19
HORVU6Hr1G066420.1	Barley	cytosol, peroxisome, plastid	46.58	31.64
TraesCS2A01G040800.1	Wheat	cytosol	46.58	31.64
TraesCS6B01G288300.1	Wheat	peroxisome	44.95	31.58
HORVU0Hr1G023570.1	Barley	cytosol, peroxisome, plastid	46.58	31.43
TraesCS6A01G260900.1	Wheat	peroxisome	44.63	31.28
Os11t0182200-01	Rice	cytosol	45.28	31.1
TraesCS2A01G040600.1	Wheat	cytosol	43.0	29.93
Zm00001d020530_P001	Maize	cytosol, extracellular	38.44	27.19
Zm00001d032148_P001	Maize	cytosol	37.13	26.45
Zm00001d018367_P001	Maize	cytosol	36.48	25.34
Zm00001d045091_P001	Maize	cytosol	34.85	24.71
Zm00001d037073_P001	Maize	cytosol	35.18	24.66
Zm00001d050455_P001	Maize	plastid	35.5	23.04
Zm00001d020528_P001	Maize	cytosol	32.9	22.75
Zm00001d045092_P001	Maize	cytosol	32.57	22.73
Zm00001d041341_P001	Maize	cytosol	27.69	21.2
Zm00001d017186_P001	Maize	extracellular	29.97	20.63
Zm00001d027948_P001	Maize	cytosol	22.48	15.58
Zm00001d033521_P001	Maize	cytosol	22.48	15.2
Zm00001d006260_P001	Maize	cytosol	19.87	15.02
Zm00001d027946_P001	Maize	cytosol	21.17	14.67
Zm00001d021324_P001	Maize	cytosol	20.85	14.41
Zm00001d048871_P001	Maize	peroxisome	21.17	14.01
Zm00001d052449_P001	Maize	cytosol, peroxisome, plastid	20.52	13.82
Zm00001d021329_P001	Maize	cytosol	20.2	13.81
Zm00001d006263_P001	Maize	cytosol	19.54	13.48
Zm00001d048870_P001	Maize	peroxisome	19.87	13.41
Zm00001d022592_P001	Maize	cytosol	19.22	13.26
Zm00001d030542_P001	Maize	plastid	18.89	13.15
Zm00001d007606_P001	Maize	peroxisome	19.87	13.06
Zm00001d048872_P001	Maize	cytosol	19.22	12.77
Zm00001d003856_P001	Maize	cytosol	17.59	12.05
Zm00001d030540_P001	Maize	plastid	8.47	9.52

Protein Annotations

EnsemblPlants:Zm00001d039951_P001	EnsemblPlants:Zm00001d039951_T001	EnsemblPlantsGene:Zm00001d039951	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF16	PFAM:PF02458	ProteinID:ONM30210.1	SEG:seg	UniParc:UPI000844FD22	UniProt:A0A1D6MLX2
MapMan:35.1	:	:	:	:	:

Description

Spermidine hydroxycinnamoyl transferase

Coordinates

chr3:-:20366779..20367924

Molecular Weight (calculated)

33619.4 Da

IEP (calculated)

8.725

GRAVY (calculated)

-0.061

Length

307 amino acids

Sequence
(BLAST)

001: MANVMDSEAV QVVESSFVVS SEPTPSEGLW LSPLDLILAN RGHTPTVYLY SSSSNAVAAA DGFFDVARLK EAMAKTLVAF YPLAGRLGVN NDDGRAEITC
101: TGEGALFVVA HADLTVGDIE DDFRSSPELR RLFVPRIEPA SIILAIQHMH ALVCRVCLMQ WSSRARSPPT VHPDALSRFY PRLTFSDPSG PLAFQVFVIF
201: KDQVTSLKRL CGGTSTFCAI GALVWPCTLV ARRLPPDSEA RLTFSANVQR RVRPPLPSPE PLLRQCIGQA GRHRCSSRCC FGGSGVRGRP HQRRRRSGGR
301: RVDDELV

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.