Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0205000-00 | Rice | cytosol | 32.26 | 47.9 |
| HORVU6Hr1G066420.1 | Barley | cytosol, peroxisome, plastid | 55.24 | 30.31 |
| HORVU0Hr1G023570.1 | Barley | cytosol, peroxisome, plastid | 55.24 | 30.11 |
| Zm00001d039951_P001 | Maize | nucleus | 37.1 | 29.97 |
| OQU86302 | Sorghum | mitochondrion | 29.03 | 29.39 |
| TraesCS2A01G040600.1 | Wheat | cytosol | 50.0 | 28.12 |
| KXG31953 | Sorghum | cytosol, endoplasmic reticulum, peroxisome | 48.39 | 27.65 |
| Zm00001d039956_P001 | Maize | peroxisome | 47.18 | 26.96 |
| KXG31952 | Sorghum | cytosol | 44.76 | 26.75 |
| KXG31859 | Sorghum | peroxisome | 46.77 | 26.54 |
| Zm00001d039952_P002 | Maize | peroxisome | 46.37 | 26.44 |
| KXG31858 | Sorghum | peroxisome | 45.97 | 26.39 |
| KXG31860 | Sorghum | cytosol, peroxisome, plastid | 46.37 | 26.38 |
| OQU75613 | Sorghum | cytosol, peroxisome, plastid | 46.37 | 26.38 |
| EES02456 | Sorghum | cytosol, peroxisome, plastid | 47.98 | 26.27 |
| Zm00001d039837_P002 | Maize | peroxisome | 45.16 | 26.23 |
| KXG31861 | Sorghum | cytosol, peroxisome, plastid | 45.97 | 25.91 |
| Zm00001d039840_P001 | Maize | peroxisome | 45.56 | 25.86 |
| HORVU2Hr1G109470.1 | Barley | cytosol | 20.56 | 25.76 |
| Zm00001d039833_P001 | Maize | cytosol | 45.97 | 25.5 |
| HORVU5Hr1G108900.1 | Barley | peroxisome | 45.97 | 25.39 |
| Os08t0543400-02 | Rice | cytosol, plasma membrane | 44.76 | 25.11 |
| Zm00001d039947_P002 | Maize | plasma membrane | 47.18 | 25.11 |
| HORVU6Hr1G012740.1 | Barley | peroxisome | 43.15 | 24.43 |
| Os11t0182200-01 | Rice | cytosol | 43.15 | 23.94 |
| EER96600 | Sorghum | peroxisome | 41.94 | 23.91 |
| HORVU6Hr1G081260.1 | Barley | peroxisome | 45.56 | 23.79 |
| Zm00001d005607_P001 | Maize | cytosol | 41.53 | 23.46 |
| EES02467 | Sorghum | cytosol, peroxisome, plastid | 41.53 | 23.04 |
| HORVU3Hr1G097120.2 | Barley | cytosol, plasma membrane | 40.32 | 22.52 |
| HORVU7Hr1G118090.1 | Barley | cytosol | 35.89 | 20.32 |
| HORVU5Hr1G064280.1 | Barley | plastid | 34.68 | 19.63 |
| HORVU6Hr1G056230.2 | Barley | cytosol | 33.06 | 18.59 |
| HORVU7Hr1G030740.3 | Barley | cytosol | 32.26 | 18.48 |
| HORVU7Hr1G030780.1 | Barley | cytosol | 31.05 | 17.91 |
| HORVU7Hr1G030670.1 | Barley | mitochondrion | 32.66 | 17.57 |
| HORVU1Hr1G081430.3 | Barley | cytosol, peroxisome, plastid | 23.39 | 15.22 |
| HORVU2Hr1G086380.1 | Barley | cytosol, nucleus, plastid | 33.87 | 14.43 |
| KXG31863 | Sorghum | plastid | 21.37 | 14.17 |
| HORVU2Hr1G109430.2 | Barley | cytosol | 22.18 | 12.56 |
| HORVU4Hr1G077720.7 | Barley | cytosol, extracellular, peroxisome | 20.97 | 12.06 |
| HORVU5Hr1G044390.1 | Barley | cytosol, peroxisome, plastid | 20.97 | 11.63 |
| HORVU4Hr1G004050.1 | Barley | cytosol | 20.16 | 11.26 |
| HORVU1Hr1G019380.2 | Barley | cytosol, mitochondrion, plasma membrane | 20.97 | 11.21 |
| HORVU5Hr1G084820.2 | Barley | cytosol | 19.35 | 11.06 |
| HORVU5Hr1G084810.1 | Barley | cytosol | 18.95 | 10.96 |
| HORVU5Hr1G079580.1 | Barley | mitochondrion | 18.95 | 10.78 |
| HORVU5Hr1G077720.1 | Barley | mitochondrion | 18.95 | 10.78 |
| HORVU6Hr1G073010.3 | Barley | cytosol | 18.95 | 10.63 |
| HORVU6Hr1G088480.1 | Barley | extracellular, plasma membrane | 20.16 | 10.62 |
| HORVU4Hr1G077780.1 | Barley | peroxisome | 19.35 | 10.53 |
| HORVU4Hr1G077790.1 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 18.95 | 10.51 |
| HORVU2Hr1G125370.1 | Barley | cytosol | 17.74 | 10.3 |
| HORVU2Hr1G125270.1 | Barley | peroxisome | 17.74 | 10.0 |
| HORVU7Hr1G030410.3 | Barley | peroxisome | 17.74 | 9.52 |
| HORVU5Hr1G084980.1 | Barley | cytosol | 16.94 | 9.05 |
| HORVU2Hr1G002500.2 | Barley | cytosol | 13.71 | 6.06 |
| HORVU2Hr1G109590.1 | Barley | cytosol | 6.45 | 4.95 |
| HORVU6Hr1G088530.1 | Barley | cytosol | 0.81 | 1.21 |
| HORVU2Hr1G124070.1 | Barley | cytosol | 0.4 | 0.33 |
| HORVU3Hr1G027720.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G112120.3 | EnsemblPlantsGene:HORVU2Hr1G112120 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | ncoils:Coil | PANTHER:PTHR31642 |
| PANTHER:PTHR31642:SF16 | PFAM:PF02458 | SEG:seg | UniParc:UPI000B489702 | UniProt:A0A287JGJ9 | MapMan:50.2.3 |
Description
No Description!
Coordinates
chrchr2H:-:724986394..724987647
Molecular Weight (calculated)
23380.4 Da
IEP (calculated)
7.806
GRAVY (calculated)
0.347
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: ITMGSGPVLR VVKSCFVTPS GETPRKRLWL SALDLVLASR GHTPLVHFYS AGDVAAAGDG FFSVARLKES LAKALVPFYP LAGRLGVDPD GRFEIDCNGE
101: GALFVVAHSD RTFDDFSDHK PTPETRRLFC PPVQPSSVIL AVQVTFLRCG GVVLGTATHH AAADGPSTFX XXXXXXXXXX XXXXXXXXXX XXXXXXXRDL
201: FIPINGGFII ASIGRVAVGL DLIVCSVHIT CISSMVILFP NTSNCVRA
101: GALFVVAHSD RTFDDFSDHK PTPETRRLFC PPVQPSSVIL AVQVTFLRCG GVVLGTATHH AAADGPSTFX XXXXXXXXXX XXXXXXXXXX XXXXXXXRDL
201: FIPINGGFII ASIGRVAVGL DLIVCSVHIT CISSMVILFP NTSNCVRA
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.