Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31953 | Sorghum | cytosol, endoplasmic reticulum, peroxisome | 66.21 | 66.36 |
| OQU75613 | Sorghum | cytosol, peroxisome, plastid | 59.54 | 59.4 |
| KXG31860 | Sorghum | cytosol, peroxisome, plastid | 59.54 | 59.4 |
| KXG31861 | Sorghum | cytosol, peroxisome, plastid | 59.08 | 58.41 |
| KXG31859 | Sorghum | peroxisome | 58.62 | 58.35 |
| EES02456 | Sorghum | cytosol, peroxisome, plastid | 60.69 | 58.28 |
| KXG31858 | Sorghum | peroxisome | 57.7 | 58.1 |
| KXG31952 | Sorghum | cytosol | 54.71 | 57.35 |
| Os08t0543400-02 | Rice | cytosol, plasma membrane | 57.01 | 56.11 |
| KXG31863 | Sorghum | plastid | 47.13 | 54.81 |
| TraesCS6D01G241700.1 | Wheat | cytosol | 55.17 | 54.79 |
| TraesCS6A01G260900.1 | Wheat | peroxisome | 54.48 | 54.11 |
| TraesCS6B01G288300.1 | Wheat | peroxisome | 54.25 | 54.0 |
| Os11t0182200-01 | Rice | cytosol | 54.94 | 53.47 |
| Zm00001d005607_P001 | Maize | cytosol | 52.64 | 52.16 |
| EES02467 | Sorghum | cytosol, peroxisome, plastid | 53.56 | 52.13 |
| HORVU6Hr1G066420.1 | Barley | cytosol, peroxisome, plastid | 54.02 | 51.99 |
| HORVU0Hr1G023570.1 | Barley | cytosol, peroxisome, plastid | 54.02 | 51.65 |
| Os08t0205000-00 | Rice | cytosol | 19.54 | 50.9 |
| OQU86302 | Sorghum | mitochondrion | 28.28 | 50.2 |
| TraesCS2A01G040800.1 | Wheat | cytosol | 51.49 | 49.56 |
| EER98920 | Sorghum | cytosol | 44.37 | 44.57 |
| EES15064 | Sorghum | cytosol | 43.68 | 42.89 |
| HORVU2Hr1G112120.3 | Barley | mitochondrion | 23.91 | 41.94 |
| EES15065 | Sorghum | cytosol, peroxisome, plastid | 41.38 | 40.36 |
| EES07672 | Sorghum | cytosol | 41.61 | 40.13 |
| EER87979 | Sorghum | cytosol | 38.85 | 38.85 |
| KXG19490 | Sorghum | cytosol | 38.85 | 38.85 |
| EER89344 | Sorghum | cytosol | 38.16 | 37.99 |
| TraesCS2A01G040600.1 | Wheat | cytosol | 38.39 | 37.87 |
| EER98918 | Sorghum | cytosol, peroxisome, plastid | 38.16 | 36.64 |
| EES11073 | Sorghum | mitochondrion | 34.25 | 33.79 |
| EES05411 | Sorghum | cytosol | 34.71 | 33.71 |
| OQU91195 | Sorghum | cytosol | 27.82 | 26.42 |
| OQU89853 | Sorghum | cytosol | 23.45 | 23.02 |
| OQU83825 | Sorghum | peroxisome, plastid | 22.76 | 22.35 |
| EES09214 | Sorghum | cytosol, peroxisome, plastid | 21.15 | 20.31 |
| EES10710 | Sorghum | cytosol | 21.38 | 20.31 |
| EER88164 | Sorghum | cytosol | 15.4 | 19.31 |
Protein Annotations
| EnsemblPlants:EER96600 | EnsemblPlantsGene:SORBI_3002G175600 | EntrezGene:8054592 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016740 | GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 |
| PANTHER:PTHR31642:SF16 | PFAM:PF02458 | ProteinID:EER96600 | ProteinID:EER96600.1 | RefSeq:XP_002460079.1 | SEG:seg |
| SUPFAM:SSF52777 | UniParc:UPI0001A8396C | UniProt:C5XAI4 | MapMan:50.2.3 | : | : |
Description
hypothetical protein
Coordinates
chr2:+:55472399..55477058
Molecular Weight (calculated)
46997.6 Da
IEP (calculated)
7.106
GRAVY (calculated)
0.069
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDDKVEVL ESCFVAPREA TPTKGLRLSP FDLALANRGH TPLVYVYRSG AAFFDVVRLK SAMAKALVAF YPLAGRLGAG DDGRVQIYCN GEGPLFVVAR
101: SFVTANSINF SKPSPELRRM FVPRIEPPSL ILAVQVTFLK CGAVALGVAV HHAAVDAMSL FHFMQTWSAI TRDDGDGAAV ELELPCHDRT LLRARSPPSV
201: HPSALSVLCP RVVFSETSEP TATEAFTISA DELATLKRLC GGASTFCSVS ALVWRCRCAS IARRLPPDAE ARLSFPANVR RHVTPPLPDR YFGNALVWLG
301: ATAAARDVAS EPLASVAERV GGAVARMDDE LVRSAVDYLE LADEVDSRPL RGSMPETELR VISWLGMPAY EADFGGGSPQ VMSRAESVRG GFVYVMNDGR
401: PADSSGVRVV MCTKAADMKE FERLLYANIA KPSKL
101: SFVTANSINF SKPSPELRRM FVPRIEPPSL ILAVQVTFLK CGAVALGVAV HHAAVDAMSL FHFMQTWSAI TRDDGDGAAV ELELPCHDRT LLRARSPPSV
201: HPSALSVLCP RVVFSETSEP TATEAFTISA DELATLKRLC GGASTFCSVS ALVWRCRCAS IARRLPPDAE ARLSFPANVR RHVTPPLPDR YFGNALVWLG
301: ATAAARDVAS EPLASVAERV GGAVARMDDE LVRSAVDYLE LADEVDSRPL RGSMPETELR VISWLGMPAY EADFGGGSPQ VMSRAESVRG GFVYVMNDGR
401: PADSSGVRVV MCTKAADMKE FERLLYANIA KPSKL
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.