CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31863	Sorghum	plastid	56.73	37.17
KXG31859	Sorghum	peroxisome	65.71	36.84
KXG31861	Sorghum	cytosol, peroxisome, plastid	62.86	35.0
OQU75613	Sorghum	cytosol, peroxisome, plastid	62.04	34.86
KXG31860	Sorghum	cytosol, peroxisome, plastid	62.04	34.86
EES02456	Sorghum	cytosol, peroxisome, plastid	62.86	34.0
KXG31858	Sorghum	peroxisome	57.55	32.64
KXG31953	Sorghum	cytosol, endoplasmic reticulum, peroxisome	57.14	32.26
HORVU2Hr1G112120.3	Barley	mitochondrion	29.39	29.03
EER96600	Sorghum	peroxisome	50.2	28.28
EES02467	Sorghum	cytosol, peroxisome, plastid	51.43	28.19
Os08t0543400-02	Rice	cytosol, plasma membrane	50.61	28.05
TraesCS6B01G288300.1	Wheat	peroxisome	49.8	27.92
TraesCS6D01G241700.1	Wheat	cytosol	49.39	27.63
TraesCS6A01G260900.1	Wheat	peroxisome	48.57	27.17
KXG31952	Sorghum	cytosol	45.31	26.75
HORVU6Hr1G066420.1	Barley	cytosol, peroxisome, plastid	48.98	26.55
HORVU0Hr1G023570.1	Barley	cytosol, peroxisome, plastid	48.98	26.37
Os08t0205000-00	Rice	cytosol	17.96	26.35
Os11t0182200-01	Rice	cytosol	45.71	25.06
TraesCS2A01G040800.1	Wheat	cytosol	44.49	24.11
TraesCS2A01G040600.1	Wheat	cytosol	40.0	22.22
EER98920	Sorghum	cytosol	38.78	21.94
EES15064	Sorghum	cytosol	37.96	20.99
EES15065	Sorghum	cytosol, peroxisome, plastid	36.73	20.18
EES07672	Sorghum	cytosol	33.47	18.18
EER87979	Sorghum	cytosol	32.24	18.16
KXG19490	Sorghum	cytosol	32.24	18.16
EER89344	Sorghum	cytosol	30.2	16.93
EES11073	Sorghum	mitochondrion	30.2	16.78
EER98918	Sorghum	cytosol, peroxisome, plastid	31.02	16.78
EES05411	Sorghum	cytosol	30.2	16.52
OQU91195	Sorghum	cytosol	21.63	11.57
EES09214	Sorghum	cytosol, peroxisome, plastid	20.41	11.04
OQU89853	Sorghum	cytosol	18.78	10.38
OQU83825	Sorghum	peroxisome, plastid	17.14	9.48
EER88164	Sorghum	cytosol	13.06	9.22
EES10710	Sorghum	cytosol	17.14	9.17

Protein Annotations

EnsemblPlants:OQU86302	EnsemblPlantsGene:SORBI_3003G068950	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF16
PFAM:PF02458	ProteinID:OQU86302	ProteinID:OQU86302.1	UniParc:UPI0009DC8FED	UniProt:A0A1W0VVZ2	MapMan:50.2.3

Description

hypothetical protein

Coordinates

chr3:-:5888554..5895000

Molecular Weight (calculated)

26807.4 Da

IEP (calculated)

9.100

GRAVY (calculated)

0.003

Length

245 amino acids

Sequence
(BLAST)

001: MPTKAILQRS TCTQGAPTML PRRLISSTWL GSRRLWPEPW WPYPSPAAFG INNDDGDGKM EISCNGEGAL FVVAQADDLT ADDVKKFKPP PELRRLFVPL
101: VEPSSIMLAV QVTFLKYGGV ALGTAVHHVA VDALSAFHFF QTWSAFSKHG NRPTVELSCH DRTLLRARSP PAVHPNALSM FYPKHILSNP SRPLAIQVFT
201: ISNDWIASLK HLCGGGTSTF CVVSALSCGS AHALRVDSHL ILKHT

Best Arabidopsis Sequence Match ( AT3G29720.1 )
(BLAST)

001: MTKDESNGDN PDDGDAAKEN ITVGRLALQV VESEADFSYI SSKELRLEAE LRPLVPELQV SSDSASILSI QITFFPNQGF SIGTIVHHVV MDGKTASKFY
101: KAWAHICKHG NIPQDFDLPM VLDRTVINVP AGLEPKLFQL LPYLSKEKVN ARNLMLPPAK ENINVVRVTL ELSEANIKKL KEQAKNESTW SDLLLSTFVV
201: TYEKSSGQSL FCKEEAKKSL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4J485]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.