CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018367_P001	Maize	cytosol	89.14	90.95
Os06t0184900-01	Rice	cytosol, peroxisome, plastid	73.61	74.61
HORVU7Hr1G030670.1	Barley	mitochondrion	74.72	73.1
GSMUA_Achr6P01940_001	Banana	cytosol, plasma membrane, plastid	55.21	57.37
GSMUA_Achr6P01960_001	Banana	cytosol, plasma membrane, plastid	42.57	56.64
EER98918	Sorghum	cytosol, peroxisome, plastid	46.56	46.36
EER98920	Sorghum	cytosol	44.35	46.19
KXG31953	Sorghum	cytosol, endoplasmic reticulum, peroxisome	42.57	44.24
EES15064	Sorghum	cytosol	43.24	44.02
KXG19490	Sorghum	cytosol	42.13	43.68
EER87979	Sorghum	cytosol	42.13	43.68
EER89344	Sorghum	cytosol	42.13	43.48
EER96600	Sorghum	peroxisome	40.13	41.61
EES15065	Sorghum	cytosol, peroxisome, plastid	40.35	40.81
KXG31859	Sorghum	peroxisome	39.25	40.5
KXG31861	Sorghum	cytosol, peroxisome, plastid	38.36	39.32
EES05411	Sorghum	cytosol	39.02	39.29
KXG31952	Sorghum	cytosol	36.14	39.28
KXG31860	Sorghum	cytosol, peroxisome, plastid	37.92	39.22
OQU75613	Sorghum	cytosol, peroxisome, plastid	37.92	39.22
KXG31858	Sorghum	peroxisome	37.47	39.12
EES02456	Sorghum	cytosol, peroxisome, plastid	39.25	39.07
EES11073	Sorghum	mitochondrion	37.92	38.78
EES02467	Sorghum	cytosol, peroxisome, plastid	35.7	36.02
KXG31863	Sorghum	plastid	29.49	35.56
OQU86302	Sorghum	mitochondrion	18.18	33.47
OQU91195	Sorghum	cytosol	31.26	30.79
OQU89853	Sorghum	cytosol	27.72	28.22
OQU83825	Sorghum	peroxisome, plastid	26.61	27.09
EES09214	Sorghum	cytosol, peroxisome, plastid	24.61	24.5
EES10710	Sorghum	cytosol	24.61	24.24
EER88164	Sorghum	cytosol	18.63	24.21

Protein Annotations

EnsemblPlants:EES07672	EnsemblPlantsGene:SORBI_3004G328700	EntrezGene:8081980	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	GO:GO:0050734	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31642	PANTHER:PTHR31642:SF15	PFAM:PF02458	ProteinID:EES07672	ProteinID:EES07672.1	RefSeq:XP_002454696.1
SEG:seg	UniParc:UPI0001A86288	UniProt:C5XUF0	MapMan:50.2.3	:	:

Description

hypothetical protein

Coordinates

chr4:-:66293923..66295671

Molecular Weight (calculated)

48109.4 Da

IEP (calculated)

5.181

GRAVY (calculated)

-0.005

Length

451 amino acids

Sequence
(BLAST)

001: MAVEILESCM VKPSDDAGTT TTPMHVVWLS NLDLLVARSH TPTIYVYRRP ASPDVPGFFS PDVLKAALSK ALVPFYPLAG RLAQDGAGRP EIHCTGDGAL
101: FVTARADVTL QDLATAGGLA PSDELRQMLV PSAADDGEDR AGILAMFQVT SFKCGGVCVG AAIHHTAADG LAALDFVNTW AAIASKGVDE AAPRPWLDRT
201: LLRARSPPDV RFDHSEYSRR GGGDPKAARV PFDSAILPMS KAQLDALKGG GGEGSKKVST FKAVVAHVWR CACTARGLAQ DEDTRLYMTA DARSRVRPPL
301: PEGYLGNAIF RASTVAKAGD VVSEPLDAVA GRVSGATARL DDEYVRSLVD CLEQVVSDAA GLRKGEWVMP ETDLWVISWQ GLPIYDADFG WGRPAFMGRA
401: CLQFSGLVYL VPGPDGDGRL DVVVAMEPKS LARFKELFYE LEGAAVPCMA N

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.