Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032148_P001 | Maize | cytosol | 90.29 | 92.81 |
| TraesCS7A01G537300.1 | Wheat | cytosol | 81.49 | 82.99 |
| TraesCS7D01G524200.1 | Wheat | cytosol | 81.04 | 82.34 |
| TraesCS7B01G455100.1 | Wheat | cytosol | 79.68 | 81.71 |
| HORVU7Hr1G118090.1 | Barley | cytosol | 80.59 | 81.51 |
| EER98920 | Sorghum | cytosol | 70.65 | 72.29 |
| EES15065 | Sorghum | cytosol, peroxisome, plastid | 71.78 | 71.3 |
| KXG31953 | Sorghum | cytosol, endoplasmic reticulum, peroxisome | 46.05 | 47.0 |
| EER96600 | Sorghum | peroxisome | 42.89 | 43.68 |
| EER98918 | Sorghum | cytosol, peroxisome, plastid | 44.24 | 43.27 |
| EES07672 | Sorghum | cytosol | 44.02 | 43.24 |
| KXG31859 | Sorghum | peroxisome | 42.44 | 43.02 |
| KXG31858 | Sorghum | peroxisome | 41.76 | 42.82 |
| OQU75613 | Sorghum | cytosol, peroxisome, plastid | 41.99 | 42.66 |
| KXG31860 | Sorghum | cytosol, peroxisome, plastid | 41.99 | 42.66 |
| KXG31952 | Sorghum | cytosol | 39.95 | 42.65 |
| KXG31861 | Sorghum | cytosol, peroxisome, plastid | 41.76 | 42.05 |
| EES02456 | Sorghum | cytosol, peroxisome, plastid | 41.76 | 40.84 |
| EER89344 | Sorghum | cytosol | 39.73 | 40.27 |
| EER87979 | Sorghum | cytosol | 39.5 | 40.23 |
| KXG19490 | Sorghum | cytosol | 39.5 | 40.23 |
| EES02467 | Sorghum | cytosol, peroxisome, plastid | 39.05 | 38.7 |
| OQU86302 | Sorghum | mitochondrion | 20.99 | 37.96 |
| EES11073 | Sorghum | mitochondrion | 37.7 | 37.87 |
| EES05411 | Sorghum | cytosol | 38.15 | 37.72 |
| KXG31863 | Sorghum | plastid | 31.6 | 37.43 |
| OQU91195 | Sorghum | cytosol | 30.47 | 29.48 |
| OQU89853 | Sorghum | cytosol | 26.41 | 26.41 |
| OQU83825 | Sorghum | peroxisome, plastid | 24.83 | 24.83 |
| EES10710 | Sorghum | cytosol | 25.28 | 24.45 |
| EES09214 | Sorghum | cytosol, peroxisome, plastid | 23.02 | 22.52 |
| EER88164 | Sorghum | cytosol | 16.48 | 21.04 |
Protein Annotations
| EnsemblPlants:EES15064 | EnsemblPlantsGene:SORBI_3007G142100 | EntrezGene:8077854 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016740 | GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 |
| PANTHER:PTHR31642:SF25 | PFAM:PF02458 | ProteinID:EES15064 | ProteinID:EES15064.1 | RefSeq:XP_002445569.1 | SEG:seg |
| unigene:Sbi.5358 | UniParc:UPI0001A87B9C | UniProt:C5YLM3 | MapMan:50.2.3 | : | : |
Description
hypothetical protein
Coordinates
chr7:-:57193804..57198082
Molecular Weight (calculated)
48178.9 Da
IEP (calculated)
6.507
GRAVY (calculated)
0.006
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVDVVGTTL VAPSEDTPRR ELWLSNLDLA VPKTHTPLVY YYPAPAPAAA TGTDDGGDRA AFFAPERLEA ALARALVPFY PLAGRLGVGV GEGGRLRIDC
101: NAQGALFVVA RADFAGEDVF GDTDGGYEPS PEVRRMFVPF VPSGDPPCVM SMFQVTFLKC GGVVLGTGIH HVTMDGMGAF HFMQTWTGVA RGLDVAEACG
201: PLPPFHDRTL LRARSPPTPA FDHPVYSPSL LNGRPRPFVT RVYAVSPKLL ADVKSRCAPG VSTYCAVTAH LWRCMCVARG LAPCSDTRLR VPANVRHRLR
301: PALPRSYFGN AIVRDLVVAR VEDVLDRPLG FVAQAIKDAV DRVDDAYVRS VVDYLEVESE KGSQAARGQL MPESDLWVVS WLGMPMYDAD FGWGTPRFVA
401: PAQMFGSGTA YVTQRANKDD GIAVLFGLEP QYLQCFEKVF YGE
101: NAQGALFVVA RADFAGEDVF GDTDGGYEPS PEVRRMFVPF VPSGDPPCVM SMFQVTFLKC GGVVLGTGIH HVTMDGMGAF HFMQTWTGVA RGLDVAEACG
201: PLPPFHDRTL LRARSPPTPA FDHPVYSPSL LNGRPRPFVT RVYAVSPKLL ADVKSRCAPG VSTYCAVTAH LWRCMCVARG LAPCSDTRLR VPANVRHRLR
301: PALPRSYFGN AIVRDLVVAR VEDVLDRPLG FVAQAIKDAV DRVDDAYVRS VVDYLEVESE KGSQAARGQL MPESDLWVVS WLGMPMYDAD FGWGTPRFVA
401: PAQMFGSGTA YVTQRANKDD GIAVLFGLEP QYLQCFEKVF YGE
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.