Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G524200.1 | Wheat | cytosol | 95.17 | 94.95 |
| TraesCS7B01G455100.1 | Wheat | cytosol | 93.79 | 94.44 |
| HORVU7Hr1G118090.1 | Barley | cytosol | 93.1 | 92.47 |
| Zm00001d032148_P001 | Maize | cytosol | 81.38 | 82.13 |
| EES15064 | Sorghum | cytosol | 82.99 | 81.49 |
| TraesCS5A01G222700.1 | Wheat | cytosol | 74.71 | 74.71 |
| EES15065 | Sorghum | cytosol, peroxisome, plastid | 68.74 | 67.04 |
| Zm00001d050455_P001 | Maize | plastid | 68.74 | 63.21 |
| Zm00001d041341_P001 | Maize | cytosol | 47.36 | 51.37 |
| TraesCS6A01G336100.1 | Wheat | cytosol | 44.83 | 46.32 |
| TraesCS3A01G507100.1 | Wheat | peroxisome | 44.6 | 45.65 |
| TraesCS3A01G506800.1 | Wheat | peroxisome | 46.67 | 45.52 |
| TraesCS6A01G022900.1 | Wheat | cytosol, plasma membrane, plastid | 31.03 | 44.7 |
| TraesCS6A01G260900.1 | Wheat | peroxisome | 43.22 | 42.92 |
| TraesCS7A01G018100.1 | Wheat | cytosol | 39.54 | 42.57 |
| TraesCS7A01G150000.1 | Wheat | cytosol | 42.07 | 42.46 |
| TraesCS2A01G040800.1 | Wheat | cytosol | 43.91 | 42.26 |
| TraesCS7A01G150200.1 | Wheat | cytosol | 41.38 | 41.96 |
| TraesCS5A01G222900.1 | Wheat | cytosol | 29.2 | 39.69 |
| TraesCS6A01G232200.1 | Wheat | cytosol | 39.77 | 39.14 |
| TraesCS2A01G354500.1 | Wheat | mitochondrion | 39.08 | 38.46 |
| TraesCS6A01G022100.1 | Wheat | peroxisome | 40.46 | 38.1 |
| TraesCS4A01G473500.1 | Wheat | mitochondrion, plastid | 41.61 | 37.63 |
| TraesCS3A01G517500.1 | Wheat | mitochondrion | 36.78 | 35.87 |
| TraesCS2A01G040600.1 | Wheat | cytosol | 31.72 | 31.29 |
| TraesCS4A01G003300.1 | Wheat | cytosol, extracellular, peroxisome | 28.51 | 28.77 |
| TraesCS7A01G023200.1 | Wheat | plastid | 18.62 | 28.42 |
| TraesCS5A01G337500.1 | Wheat | cytosol | 28.05 | 28.11 |
| TraesCS4A01G002900.1 | Wheat | cytosol, extracellular, peroxisome | 19.77 | 28.1 |
| TraesCS1A01G088400.1 | Wheat | cytosol | 28.28 | 28.08 |
| TraesCS1A01G088300.1 | Wheat | cytosol | 28.28 | 28.08 |
| TraesCS2A01G570600.1 | Wheat | cytosol | 28.05 | 27.79 |
| TraesCS4A01G287700.1 | Wheat | mitochondrion | 9.89 | 27.56 |
| TraesCS5A01G337700.1 | Wheat | cytosol | 27.36 | 27.42 |
| TraesCS4A01G003400.1 | Wheat | cytosol | 26.67 | 27.36 |
| TraesCS5A01G304000.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 27.13 | 27.25 |
| TraesCS5A01G337900.1 | Wheat | cytosol | 27.13 | 27.19 |
| TraesCS5A01G337800.1 | Wheat | cytosol | 27.13 | 27.19 |
| TraesCS7A01G148300.1 | Wheat | peroxisome | 27.36 | 26.74 |
| TraesCS6A01G375300.1 | Wheat | mitochondrion | 27.82 | 26.71 |
| TraesCS5A01G338700.1 | Wheat | cytosol | 26.9 | 26.65 |
| TraesCS4A01G285200.1 | Wheat | cytosol | 28.28 | 26.45 |
| TraesCS4A01G003100.1 | Wheat | peroxisome | 27.36 | 26.39 |
| TraesCS5A01G338600.1 | Wheat | cytosol | 26.67 | 26.3 |
| TraesCS5A01G549100.1 | Wheat | cytosol | 15.63 | 26.25 |
| TraesCS4A01G287500.1 | Wheat | cytosol | 28.05 | 26.24 |
| TraesCS2A01G490000.1 | Wheat | cytosol | 25.98 | 25.62 |
| TraesCS6A01G292100.1 | Wheat | cytosol | 25.98 | 25.51 |
| TraesCS2A01G490700.1 | Wheat | plastid | 27.82 | 24.15 |
| TraesCS5A01G137500.1 | Wheat | plastid | 24.14 | 23.33 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G537300.1 | EnsemblPlantsGene:TraesCS7A01G537300 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF25 |
| PFAM:PF02458 | SEG:seg | SUPFAM:SSF52777 | MapMan:50.2.3 | : | : |
Description
No Description!
Coordinates
chr7A:-:714672781..714677915
Molecular Weight (calculated)
47783.5 Da
IEP (calculated)
6.350
GRAVY (calculated)
-0.035
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKVEVVEST LVAPSEETPR RALWLSNLDL AVPKTHTPLV YYYPAPAPTP DGENLDFFSP ERLKAALARA LVLFYPLAGR LGREGEGGRL QIDCNGEGAL
101: FVVARAPDVA GEDLFGSGYE PSPEIRRMFV PFVPSGDPPC LMAMFQVTFL KCGGVVLGTG IHHVTMDGMG AFHFIQTWTG LARGLALSDA CPSLPFHDRT
201: LLRARSPPHP EFDHPVYSPA YLNGAPRPFV TRVYSISPKL LTDLKSRCAP GVSTYGAVTA HLWRCMCVAR GLAPGSDTRL RVPANIRHRL RPQLPRQFFG
301: NAIVRDLVSV KVGDVLSQPL GYVADMIRKA VDHVDDAYTR SVIDYLEVES EKGSQAARGQ LMPESDLWVV SWLGMPMYDA DFGWGAPRFV APAQMFGSGT
401: AYVTQRGADR DDGIAVLFAL EPEYLQCFQD VFYGE
101: FVVARAPDVA GEDLFGSGYE PSPEIRRMFV PFVPSGDPPC LMAMFQVTFL KCGGVVLGTG IHHVTMDGMG AFHFIQTWTG LARGLALSDA CPSLPFHDRT
201: LLRARSPPHP EFDHPVYSPA YLNGAPRPFV TRVYSISPKL LTDLKSRCAP GVSTYGAVTA HLWRCMCVAR GLAPGSDTRL RVPANIRHRL RPQLPRQFFG
301: NAIVRDLVSV KVGDVLSQPL GYVADMIRKA VDHVDDAYTR SVIDYLEVES EKGSQAARGQ LMPESDLWVV SWLGMPMYDA DFGWGAPRFV APAQMFGSGT
401: AYVTQRGADR DDGIAVLFAL EPEYLQCFQD VFYGE
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.