Factsheet for TraesCS3A01G506800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G514600.1	Wheat	peroxisome	94.62	94.62
TraesCS7D01G436700.1	Wheat	peroxisome	88.12	92.04
TraesCS3A01G507100.1	Wheat	peroxisome	87.22	91.53
TraesCS3B01G574700.1	Wheat	peroxisome	86.32	88.1
TraesCS6A01G336100.1	Wheat	cytosol	63.9	67.7
TraesCS7A01G018100.1	Wheat	cytosol	48.65	53.71
TraesCS6A01G022100.1	Wheat	peroxisome	55.61	53.68
TraesCS6A01G022900.1	Wheat	cytosol, plasma membrane, plastid	35.87	52.98
TraesCS6A01G260900.1	Wheat	peroxisome	51.35	52.28
TraesCS2A01G040800.1	Wheat	cytosol	52.24	51.55
TraesCS4A01G473500.1	Wheat	mitochondrion, plastid	54.93	50.94
TraesCS7A01G537300.1	Wheat	cytosol	45.52	46.67
TraesCS5A01G222700.1	Wheat	cytosol	45.29	46.44
TraesCS2A01G040600.1	Wheat	cytosol	39.46	39.91
TraesCS7A01G150000.1	Wheat	cytosol	38.34	39.68
TraesCS7A01G150200.1	Wheat	cytosol	37.67	39.16
TraesCS3A01G517500.1	Wheat	mitochondrion	35.65	35.65
TraesCS6A01G232200.1	Wheat	cytosol	34.98	35.29
TraesCS2A01G354500.1	Wheat	mitochondrion	34.75	35.07
TraesCS5A01G222900.1	Wheat	cytosol	25.11	35.0
TraesCS4A01G002900.1	Wheat	cytosol, extracellular, peroxisome	17.94	26.14
TraesCS2A01G490000.1	Wheat	cytosol	25.78	26.08
TraesCS7A01G023200.1	Wheat	plastid	16.37	25.61
TraesCS4A01G285200.1	Wheat	cytosol	26.01	24.95
TraesCS6A01G375300.1	Wheat	mitochondrion	25.34	24.94
TraesCS1A01G088300.1	Wheat	cytosol	24.44	24.89
TraesCS5A01G338700.1	Wheat	cytosol	24.44	24.83
TraesCS4A01G003300.1	Wheat	cytosol, extracellular, peroxisome	23.99	24.83
TraesCS4A01G287500.1	Wheat	cytosol	25.78	24.73
TraesCS1A01G088400.1	Wheat	cytosol	24.22	24.66
TraesCS4A01G003400.1	Wheat	cytosol	23.32	24.53
TraesCS5A01G337500.1	Wheat	cytosol	23.77	24.42
TraesCS5A01G338600.1	Wheat	cytosol	23.77	24.04
TraesCS5A01G337900.1	Wheat	cytosol	23.32	23.96
TraesCS5A01G337800.1	Wheat	cytosol	23.32	23.96
TraesCS2A01G570600.1	Wheat	cytosol	23.54	23.92
TraesCS5A01G304000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	23.09	23.79
TraesCS4A01G287700.1	Wheat	mitochondrion	8.3	23.72
TraesCS5A01G549100.1	Wheat	cytosol	13.68	23.55
TraesCS5A01G337700.1	Wheat	cytosol	22.87	23.5
TraesCS2A01G490700.1	Wheat	plastid	26.01	23.15
TraesCS6A01G292100.1	Wheat	cytosol	22.87	23.02
TraesCS4A01G003100.1	Wheat	peroxisome	23.09	22.84
TraesCS7A01G148300.1	Wheat	peroxisome	22.42	22.47
TraesCS5A01G137500.1	Wheat	plastid	21.97	21.78

Protein Annotations

EnsemblPlants:TraesCS3A01G506800.1	EnsemblPlantsGene:TraesCS3A01G506800	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF16
PFAM:PF02458	SUPFAM:SSF52777	MapMan:50.2.3	:	:	:

Description

No Description!

Coordinates

chr3A:-:728105628..728106968

Molecular Weight (calculated)

48680.1 Da

IEP (calculated)

8.348

GRAVY (calculated)

0.133

Length

446 amino acids

Sequence
(BLAST)

001: MGAALSTKKA TKMSVDEVEV VELCMVAPCQ ETPRRGMWLS PLDLLLLNRG HTPAVYFYPY RSLPGDFFDV ARLKAAMAKA LVAFYPLAGR LGMDGNGRAE
101: IDCTGQGALF VVARSDLTID DFRSFLPSPE LRTLFVPRVE DHSPSVLCAV QVTFLKCGGV ALGTALHHVA VDAISAFHFL QTWSAFSKGG GAAALELPFH
201: DRTLLRARSP PFVHPDAFSV FSPQLKLSVE PSETVVTQAF VVSKDQVTAL KRACVGGDGG RVSTFCALSA HVWRCVCVAR RLPPDATTRL TFPASVRRSI
301: RPPLPPGYCG NGIIWLGAAG KVRDVASSES ENLVFVAGQI NSAVRRMDDE LVRSAIDYFE LTEINSKPAP GRMPETELRV ISWLGMPVYD VDFGWGKPLA
401: MLRAVSERAG FVYLMDSRKG DGSVRVLMCT EAAILNDFQR LLYARF

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.