Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G302000.1 | Wheat | cytosol, extracellular, peroxisome | 93.4 | 91.88 |
| TraesCS4A01G003300.1 | Wheat | cytosol, extracellular, peroxisome | 88.92 | 87.47 |
| HORVU4Hr1G077720.7 | Barley | cytosol, extracellular, peroxisome | 87.03 | 85.61 |
| TraesCS4A01G002900.1 | Wheat | cytosol, extracellular, peroxisome | 58.49 | 81.05 |
| TraesCS5A01G549100.1 | Wheat | cytosol | 44.58 | 72.97 |
| Zm00001d027948_P001 | Maize | cytosol | 75.24 | 72.01 |
| Zm00001d027946_P001 | Maize | cytosol | 75.0 | 71.78 |
| TraesCS7A01G148300.1 | Wheat | peroxisome | 73.11 | 69.66 |
| TraesCS4A01G003100.1 | Wheat | peroxisome | 72.17 | 67.85 |
| Os03t0185700-01 | Rice | cytosol, peroxisome, plasma membrane | 72.88 | 67.76 |
| TraesCS2A01G570600.1 | Wheat | cytosol | 70.05 | 67.65 |
| TraesCS6A01G292100.1 | Wheat | cytosol | 69.1 | 66.14 |
| TraesCS7A01G023200.1 | Wheat | plastid | 44.1 | 65.61 |
| Os11t0642400-01 | Rice | peroxisome | 63.44 | 60.45 |
| TraesCS1A01G088300.1 | Wheat | cytosol | 62.26 | 60.27 |
| Os11t0643100-01 | Rice | peroxisome | 63.44 | 60.04 |
| TraesCS1A01G088400.1 | Wheat | cytosol | 61.32 | 59.36 |
| TraesCS4A01G287700.1 | Wheat | mitochondrion | 15.57 | 42.31 |
| TraesCS5A01G337500.1 | Wheat | cytosol | 39.39 | 38.48 |
| TraesCS5A01G337800.1 | Wheat | cytosol | 38.92 | 38.02 |
| TraesCS5A01G337900.1 | Wheat | cytosol | 38.92 | 38.02 |
| TraesCS5A01G337700.1 | Wheat | cytosol | 38.68 | 37.79 |
| TraesCS5A01G304000.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 37.74 | 36.95 |
| TraesCS5A01G338700.1 | Wheat | cytosol | 37.74 | 36.45 |
| TraesCS5A01G338600.1 | Wheat | cytosol | 37.03 | 35.6 |
| TraesCS2A01G490000.1 | Wheat | cytosol | 35.61 | 34.24 |
| TraesCS4A01G285200.1 | Wheat | cytosol | 37.26 | 33.98 |
| TraesCS5A01G137500.1 | Wheat | plastid | 35.85 | 33.78 |
| TraesCS4A01G287500.1 | Wheat | cytosol | 37.03 | 33.76 |
| TraesCS6A01G375300.1 | Wheat | mitochondrion | 35.61 | 33.33 |
| TraesCS2A01G490700.1 | Wheat | plastid | 35.85 | 30.34 |
| TraesCS7A01G150200.1 | Wheat | cytosol | 27.12 | 26.81 |
| TraesCS5A01G222700.1 | Wheat | cytosol | 27.36 | 26.67 |
| TraesCS7A01G537300.1 | Wheat | cytosol | 27.36 | 26.67 |
| TraesCS6A01G232200.1 | Wheat | cytosol | 27.12 | 26.02 |
| TraesCS2A01G354500.1 | Wheat | mitochondrion | 27.12 | 26.02 |
| TraesCS7A01G150000.1 | Wheat | cytosol | 26.42 | 25.99 |
| TraesCS5A01G222900.1 | Wheat | cytosol | 19.58 | 25.94 |
| KRH46099 | Soybean | cytosol, plastid | 26.65 | 25.0 |
| VIT_11s0103g00200.t01 | Wine grape | cytosol | 26.65 | 24.78 |
| KRH46097 | Soybean | cytosol | 13.21 | 24.78 |
| TraesCS3A01G517500.1 | Wheat | mitochondrion | 25.94 | 24.66 |
| KRH70082 | Soybean | cytosol | 15.57 | 24.44 |
| TraesCS6A01G336100.1 | Wheat | cytosol | 24.06 | 24.23 |
| KRH08423 | Soybean | cytosol | 25.47 | 24.16 |
| KRG89744 | Soybean | cytosol | 26.42 | 24.14 |
| KRH32575 | Soybean | cytosol | 25.47 | 24.11 |
| KRG98873 | Soybean | mitochondrion | 26.18 | 24.03 |
| KRH02826 | Soybean | cytosol | 25.71 | 23.96 |
| TraesCS3A01G507100.1 | Wheat | peroxisome | 23.82 | 23.76 |
| KRH32581 | Soybean | cytosol | 24.06 | 23.72 |
| KRH46094 | Soybean | plastid | 25.71 | 23.44 |
| TraesCS3A01G506800.1 | Wheat | peroxisome | 24.53 | 23.32 |
| VIT_11s0037g00570.t01 | Wine grape | mitochondrion | 24.06 | 22.92 |
| TraesCS6A01G022900.1 | Wheat | cytosol, plasma membrane, plastid | 16.27 | 22.85 |
| KRH02825 | Soybean | cytosol | 24.76 | 22.83 |
| KRH46098 | Soybean | cytosol | 24.29 | 22.59 |
| KRG98872 | Soybean | cytosol, peroxisome, plastid | 24.76 | 22.53 |
| KRG98867 | Soybean | endoplasmic reticulum | 24.06 | 22.52 |
| KRH06686 | Soybean | peroxisome | 24.53 | 22.37 |
| TraesCS7A01G018100.1 | Wheat | cytosol | 21.23 | 22.28 |
| TraesCS2A01G040800.1 | Wheat | cytosol | 23.58 | 22.12 |
| CDY56515 | Canola | cytosol | 19.81 | 22.11 |
| CDY62143 | Canola | cytosol | 19.81 | 22.11 |
| Bra024450.1-P | Field mustard | cytosol | 19.81 | 22.11 |
| VIT_11s0037g00580.t01 | Wine grape | mitochondrion | 23.82 | 22.1 |
| KRG98999 | Soybean | mitochondrion, peroxisome, plastid | 25.0 | 22.08 |
| KRG98866 | Soybean | cytosol | 23.35 | 22.0 |
| TraesCS6A01G022100.1 | Wheat | peroxisome | 23.82 | 21.86 |
| AT2G19070.1 | Thale cress | cytosol | 23.11 | 21.73 |
| KRH46095 | Soybean | plastid | 24.29 | 21.64 |
| KRH53324 | Soybean | cytosol | 12.26 | 21.49 |
| TraesCS6A01G260900.1 | Wheat | peroxisome | 21.93 | 21.23 |
| TraesCS4A01G473500.1 | Wheat | mitochondrion, plastid | 24.06 | 21.21 |
| CDY66506 | Canola | cytosol | 21.7 | 20.81 |
| KRG98868 | Soybean | cytosol | 21.23 | 20.74 |
| KRH06685 | Soybean | plastid | 22.17 | 20.48 |
| Bra038561.1-P | Field mustard | cytosol | 21.7 | 20.4 |
| CDY03367 | Canola | cytosol | 21.46 | 20.18 |
| KRH13469 | Soybean | cytosol | 21.46 | 19.83 |
| KRH30196 | Soybean | cytosol | 22.41 | 19.75 |
| KRH30198 | Soybean | cytosol | 22.41 | 19.75 |
| TraesCS2A01G040600.1 | Wheat | cytosol | 18.4 | 17.69 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G003400.1 | EnsemblPlantsGene:TraesCS4A01G003400 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF38 |
| PFAM:PF02458 | SEG:seg | MapMan:50.2.3 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:2774540..2776250
Molecular Weight (calculated)
46015.1 Da
IEP (calculated)
5.260
GRAVY (calculated)
0.090
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKPVCSVPH PLDGEKVPLT VFDRAAADAF IPTVLVYPGP APSNEAVKEG LLRAIAAYPH LAGQLALDDH GRRFLHVNNE GVLLIEAAVP VDLADVLVDG
101: RMAGDAEDLY PTIPEENIGA ALLQIQLNRY RCGGLVVGIC SHHHAADGHS MSMFFTAWAT AVREGKDFTT PTPFLGRART SVPRSTPAPV FDHRSREFTC
201: GDRDSYAVVP MDRIKNLTVH FTAEFVADLK AHVGARCSTF QCLLAHVWKK ITAARELKPE EFTKVRVAVN CRGRANPPVP MDFFGNMVLW AFPRLQVRDV
301: LNSSYGGVVG AIRDAVARID DEYVQSFVDF GGVADANGEE LVATAAAAGT MFCPDAEVDS WLGFRFHQLD FGTGAPSAFI PPDLPIEGLM IFVPSRKANG
401: GVDLFMAVAE EHVAAFEEII YSLD
101: RMAGDAEDLY PTIPEENIGA ALLQIQLNRY RCGGLVVGIC SHHHAADGHS MSMFFTAWAT AVREGKDFTT PTPFLGRART SVPRSTPAPV FDHRSREFTC
201: GDRDSYAVVP MDRIKNLTVH FTAEFVADLK AHVGARCSTF QCLLAHVWKK ITAARELKPE EFTKVRVAVN CRGRANPPVP MDFFGNMVLW AFPRLQVRDV
301: LNSSYGGVVG AIRDAVARID DEYVQSFVDF GGVADANGEE LVATAAAAGT MFCPDAEVDS WLGFRFHQLD FGTGAPSAFI PPDLPIEGLM IFVPSRKANG
401: GVDLFMAVAE EHVAAFEEII YSLD
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.