Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G241400.1 | Wheat | mitochondrion | 33.55 | 100.0 |
| TraesCS4A01G287700.1 | Wheat | mitochondrion | 33.55 | 100.0 |
| TraesCS4A01G285200.1 | Wheat | cytosol | 99.78 | 99.78 |
| TraesCS4D01G024500.1 | Wheat | cytosol | 86.67 | 90.16 |
| TraesCS6B01G430300.1 | Wheat | cytosol | 84.52 | 87.33 |
| TraesCS4B01G026800.1 | Wheat | cytosol | 83.44 | 87.19 |
| HORVU4Hr1G004050.1 | Barley | cytosol | 82.8 | 86.71 |
| TraesCS5A01G338700.1 | Wheat | cytosol | 49.68 | 52.62 |
| TraesCS5A01G338600.1 | Wheat | cytosol | 49.68 | 52.38 |
| GSMUA_Achr8P03170_001 | Banana | cytosol | 41.08 | 50.8 |
| GSMUA_Achr8P15170_001 | Banana | cytosol | 42.15 | 50.78 |
| Solyc11g066640.1.1 | Tomato | cytosol | 47.31 | 50.11 |
| PGSC0003DMT400001145 | Potato | cytosol | 47.53 | 50.11 |
| TraesCS5A01G337500.1 | Wheat | cytosol | 46.02 | 49.31 |
| GSMUA_Achr8P03210_001 | Banana | cytosol | 37.2 | 49.15 |
| TraesCS5A01G337700.1 | Wheat | cytosol | 45.81 | 49.08 |
| Solyc06g074710.1.1 | Tomato | cytosol | 46.67 | 48.87 |
| TraesCS5A01G337800.1 | Wheat | cytosol | 45.59 | 48.85 |
| TraesCS5A01G304000.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 45.38 | 48.73 |
| PGSC0003DMT400018441 | Potato | cytosol | 46.45 | 48.54 |
| GSMUA_Achr8P03190_001 | Banana | cytosol | 36.13 | 48.41 |
| TraesCS5A01G337900.1 | Wheat | cytosol | 44.95 | 48.16 |
| TraesCS2A01G490000.1 | Wheat | cytosol | 45.16 | 47.62 |
| GSMUA_Achr8P03200_001 | Banana | cytosol | 35.27 | 47.54 |
| GSMUA_Achr8P03180_001 | Banana | plastid | 40.86 | 46.45 |
| Solyc11g071470.1.1 | Tomato | cytosol | 43.44 | 45.6 |
| TraesCS6A01G375300.1 | Wheat | mitochondrion | 43.87 | 45.03 |
| Solyc11g071480.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 42.8 | 44.92 |
| TraesCS2A01G490700.1 | Wheat | plastid | 46.88 | 43.51 |
| TraesCS7A01G023200.1 | Wheat | plastid | 25.81 | 42.11 |
| PGSC0003DMT400048126 | Potato | cytosol | 38.71 | 39.91 |
| TraesCS1A01G088300.1 | Wheat | cytosol | 35.7 | 37.9 |
| TraesCS1A01G088400.1 | Wheat | cytosol | 35.48 | 37.67 |
| TraesCS4A01G003300.1 | Wheat | cytosol, extracellular, peroxisome | 34.84 | 37.59 |
| TraesCS4A01G003400.1 | Wheat | cytosol | 33.76 | 37.03 |
| TraesCS2A01G570600.1 | Wheat | cytosol | 34.41 | 36.45 |
| TraesCS7A01G148300.1 | Wheat | peroxisome | 34.62 | 36.18 |
| TraesCS4A01G003100.1 | Wheat | peroxisome | 35.05 | 36.14 |
| TraesCS4A01G002900.1 | Wheat | cytosol, extracellular, peroxisome | 23.23 | 35.29 |
| PGSC0003DMT400048130 | Potato | cytoskeleton, cytosol, peroxisome | 42.8 | 34.97 |
| TraesCS6A01G292100.1 | Wheat | cytosol | 32.47 | 34.09 |
| TraesCS5A01G137500.1 | Wheat | plastid | 32.04 | 33.11 |
| TraesCS5A01G549100.1 | Wheat | cytosol | 18.06 | 32.43 |
| TraesCS5A01G222700.1 | Wheat | cytosol | 27.74 | 29.66 |
| TraesCS6A01G232200.1 | Wheat | cytosol | 26.88 | 28.28 |
| TraesCS5A01G222900.1 | Wheat | cytosol | 19.35 | 28.12 |
| TraesCS7A01G537300.1 | Wheat | cytosol | 26.24 | 28.05 |
| TraesCS6A01G336100.1 | Wheat | cytosol | 25.38 | 28.03 |
| TraesCS3A01G517500.1 | Wheat | mitochondrion | 25.81 | 26.91 |
| KRH02826 | Soybean | cytosol | 26.24 | 26.81 |
| KRH46099 | Soybean | cytosol, plastid | 26.02 | 26.77 |
| TraesCS6A01G022900.1 | Wheat | cytosol, plasma membrane, plastid | 17.2 | 26.49 |
| TraesCS2A01G354500.1 | Wheat | mitochondrion | 25.16 | 26.47 |
| TraesCS3A01G507100.1 | Wheat | peroxisome | 24.09 | 26.35 |
| TraesCS7A01G150200.1 | Wheat | cytosol | 24.3 | 26.34 |
| Bra024450.1-P | Field mustard | cytosol | 21.51 | 26.32 |
| CDY56515 | Canola | cytosol | 21.51 | 26.32 |
| CDY62143 | Canola | cytosol | 21.51 | 26.32 |
| KRH02825 | Soybean | cytosol | 26.02 | 26.3 |
| TraesCS7A01G018100.1 | Wheat | cytosol | 22.8 | 26.24 |
| VIT_11s0103g00200.t01 | Wine grape | cytosol | 25.38 | 25.88 |
| TraesCS3A01G506800.1 | Wheat | peroxisome | 24.73 | 25.78 |
| TraesCS7A01G150000.1 | Wheat | cytosol | 23.66 | 25.52 |
| KRH46094 | Soybean | plastid | 25.38 | 25.38 |
| KRH46097 | Soybean | cytosol | 12.26 | 25.22 |
| KRG98873 | Soybean | mitochondrion | 24.95 | 25.11 |
| VIT_11s0037g00570.t01 | Wine grape | mitochondrion | 23.87 | 24.94 |
| KRG98872 | Soybean | cytosol, peroxisome, plastid | 24.95 | 24.89 |
| KRH08423 | Soybean | cytosol | 23.66 | 24.61 |
| VIT_11s0037g00580.t01 | Wine grape | mitochondrion | 24.09 | 24.51 |
| CDY66506 | Canola | cytosol | 23.23 | 24.43 |
| KRG89744 | Soybean | cytosol | 24.3 | 24.35 |
| TraesCS6A01G260900.1 | Wheat | peroxisome | 22.8 | 24.2 |
| KRH32581 | Soybean | cytosol | 22.37 | 24.19 |
| KRH46095 | Soybean | plastid | 24.73 | 24.16 |
| TraesCS2A01G040800.1 | Wheat | cytosol | 23.44 | 24.11 |
| KRH32575 | Soybean | cytosol | 23.23 | 24.11 |
| CDY03367 | Canola | cytosol | 23.23 | 23.95 |
| KRH06686 | Soybean | peroxisome | 23.87 | 23.87 |
| KRG98867 | Soybean | endoplasmic reticulum | 23.23 | 23.84 |
| AT2G19070.1 | Thale cress | cytosol | 23.01 | 23.73 |
| TraesCS4A01G473500.1 | Wheat | mitochondrion, plastid | 24.52 | 23.7 |
| TraesCS6A01G022100.1 | Wheat | peroxisome | 23.44 | 23.59 |
| Bra038561.1-P | Field mustard | cytosol | 22.8 | 23.5 |
| KRH70082 | Soybean | cytosol | 13.55 | 23.33 |
| KRH06685 | Soybean | plastid | 23.01 | 23.31 |
| KRH46098 | Soybean | cytosol | 22.8 | 23.25 |
| KRG98866 | Soybean | cytosol | 22.15 | 22.89 |
| KRG98999 | Soybean | mitochondrion, peroxisome, plastid | 23.44 | 22.71 |
| KRH30198 | Soybean | cytosol | 23.23 | 22.45 |
| KRH30196 | Soybean | cytosol | 23.23 | 22.45 |
| KRH13469 | Soybean | cytosol | 22.15 | 22.44 |
| KRG98868 | Soybean | cytosol | 20.65 | 22.12 |
| KRH53324 | Soybean | cytosol | 11.18 | 21.49 |
| TraesCS2A01G040600.1 | Wheat | cytosol | 16.56 | 17.46 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G287500.1 | EnsemblPlantsGene:TraesCS4A01G287500 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF13 |
| PFAM:PF02458 | MapMan:50.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:592820500..592821897
Molecular Weight (calculated)
50771.7 Da
IEP (calculated)
6.890
GRAVY (calculated)
-0.168
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MHIGASKIKQ RSREADSVST SMKVKIESSK IVKPLYEDGE APERAQWVPL SVFDKVTYGE HVAIIFAFRP PNPPNSEVEL GLAKALAVYQ EWAGQIGDGP
101: DGRRSVLLND AGARFVEAKV DAPMAVSVPS GPSPEVRRLH PRIDDGPVEL VQVQLTRFSC GSLAVGFAGH HQIADGQATA NFLAAWGLAT RQLPVSPLPV
201: CDRGTRFAPR EPPLVEFPHR EVEYRAPAPN TMDEKEEIGF GAAGHDKVKV HMMHLSKDFV ARLKARASSG LPPSRRGYTT FQSVVAHLWR AITAVRGLGA
301: DVTTKVRISM NGRTRMRPPM PRDYFGNVVL WAFPRTDAGD LMSRPVGHAA ELVYRAVADV DNAYFRSFVD LASSGVVEAE GLVSTADSEQ AVLCPDLEVD
401: AWLGINFHGL NFGGGGPFRV MPTYYPMEGS LFLVPSTLGD GSMEAYVALF DDHLAEFKRI CHKID
101: DGRRSVLLND AGARFVEAKV DAPMAVSVPS GPSPEVRRLH PRIDDGPVEL VQVQLTRFSC GSLAVGFAGH HQIADGQATA NFLAAWGLAT RQLPVSPLPV
201: CDRGTRFAPR EPPLVEFPHR EVEYRAPAPN TMDEKEEIGF GAAGHDKVKV HMMHLSKDFV ARLKARASSG LPPSRRGYTT FQSVVAHLWR AITAVRGLGA
301: DVTTKVRISM NGRTRMRPPM PRDYFGNVVL WAFPRTDAGD LMSRPVGHAA ELVYRAVADV DNAYFRSFVD LASSGVVEAE GLVSTADSEQ AVLCPDLEVD
401: AWLGINFHGL NFGGGGPFRV MPTYYPMEGS LFLVPSTLGD GSMEAYVALF DDHLAEFKRI CHKID
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.