Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G287700.1 | Wheat | mitochondrion | 30.67 | 88.46 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 30.67 | 88.46 |
| TraesCS4B01G026800.1 | Wheat | cytosol | 86.44 | 87.42 |
| HORVU4Hr1G004050.1 | Barley | cytosol | 84.44 | 85.59 |
| TraesCS4A01G285200.1 | Wheat | cytosol | 87.56 | 84.73 |
| TraesCS4A01G287500.1 | Wheat | cytosol | 87.33 | 84.52 |
| TraesCS5B01G337000.1 | Wheat | cytosol | 51.33 | 52.38 |
| GSMUA_Achr8P03170_001 | Banana | cytosol | 43.33 | 51.86 |
| TraesCS5B01G337100.1 | Wheat | cytosol | 50.0 | 51.02 |
| TraesCS2B01G518900.1 | Wheat | cytosol | 49.78 | 50.79 |
| TraesCS2B01G519100.1 | Wheat | cytosol | 49.56 | 50.68 |
| GSMUA_Achr8P15170_001 | Banana | cytosol | 43.11 | 50.26 |
| PGSC0003DMT400001145 | Potato | cytosol | 48.89 | 49.89 |
| Solyc11g066640.1.1 | Tomato | cytosol | 48.67 | 49.89 |
| TraesCS5B01G304300.1 | Wheat | cytosol | 48.22 | 49.77 |
| TraesCS5B01G336300.1 | Wheat | cytosol | 47.78 | 49.54 |
| GSMUA_Achr8P03210_001 | Banana | cytosol | 38.67 | 49.43 |
| TraesCS2B01G518300.1 | Wheat | cytosol | 48.22 | 49.21 |
| Solyc06g074710.1.1 | Tomato | cytosol | 48.44 | 49.1 |
| TraesCS5B01G336500.1 | Wheat | cytosol | 47.11 | 48.85 |
| PGSC0003DMT400018441 | Potato | cytosol | 48.22 | 48.76 |
| TraesCS7B01G410100.1 | Wheat | cytosol | 47.56 | 48.64 |
| TraesCS5B01G336600.1 | Wheat | cytosol | 46.89 | 48.62 |
| TraesCS5B01G336700.1 | Wheat | cytosol | 46.89 | 48.62 |
| GSMUA_Achr8P03190_001 | Banana | cytosol | 37.33 | 48.41 |
| TraesCS6B01G412900.1 | Wheat | peroxisome | 47.11 | 48.07 |
| GSMUA_Achr8P03200_001 | Banana | cytosol | 36.44 | 47.54 |
| TraesCS2B01G604000.1 | Wheat | cytosol | 46.67 | 47.4 |
| Solyc11g071470.1.1 | Tomato | cytosol | 46.22 | 46.95 |
| GSMUA_Achr8P03180_001 | Banana | plastid | 42.44 | 46.7 |
| Solyc11g071480.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 45.33 | 46.05 |
| TraesCS2B01G604100.1 | Wheat | peroxisome | 42.0 | 42.0 |
| PGSC0003DMT400048126 | Potato | cytosol | 41.33 | 41.24 |
| TraesCS4B01G302000.1 | Wheat | cytosol, extracellular, peroxisome | 36.0 | 37.59 |
| TraesCS4B01G302100.1 | Wheat | cytosol | 36.0 | 37.59 |
| TraesCS1B01G107400.1 | Wheat | cytosol | 36.44 | 37.44 |
| TraesCS1B01G107500.1 | Wheat | cytosol | 36.22 | 37.21 |
| TraesCS1B01G107300.1 | Wheat | cytosol | 35.56 | 36.87 |
| TraesCS4B01G384800.1 | Wheat | cytosol | 35.11 | 36.66 |
| TraesCS2B01G606400.1 | Wheat | cytosol | 34.67 | 36.45 |
| PGSC0003DMT400048130 | Potato | cytoskeleton, cytosol, peroxisome | 45.33 | 35.85 |
| TraesCS4B01G302200.1 | Wheat | mitochondrion, peroxisome | 34.44 | 35.8 |
| TraesCS4B01G302300.1 | Wheat | cytosol | 33.11 | 34.73 |
| TraesCS6B01G322500.1 | Wheat | cytosol | 34.0 | 34.23 |
| TraesCS5B01G136200.1 | Wheat | plastid | 32.0 | 33.03 |
| TraesCS3B01G234500.1 | Wheat | cytosol | 29.33 | 31.35 |
| TraesCS6B01G249400.1 | Wheat | cytosol, golgi | 29.33 | 29.93 |
| TraesCS5B01G221700.1 | Wheat | cytosol | 28.67 | 29.72 |
| TraesCS7B01G455100.1 | Wheat | cytosol | 27.56 | 28.7 |
| TraesCS2B01G374600.1 | Wheat | mitochondrion | 27.78 | 28.54 |
| TraesCS3B01G002000.1 | Wheat | mitochondrion | 26.89 | 27.75 |
| TraesCS5B01G222000.1 | Wheat | plastid | 26.89 | 27.63 |
| TraesCS5B01G461000.1 | Wheat | peroxisome | 27.56 | 27.37 |
| TraesCS7B01G054100.1 | Wheat | cytosol | 26.0 | 27.27 |
| TraesCS6B01G030800.1 | Wheat | peroxisome | 26.22 | 26.88 |
| TraesCS3B01G545700.1 | Wheat | cytosol, peroxisome, plastid | 26.22 | 26.88 |
| TraesCS3B01G486400.1 | Wheat | cytosol | 25.78 | 26.73 |
| TraesCS3B01G488100.1 | Wheat | peroxisome | 25.56 | 26.56 |
| TraesCS6B01G030300.1 | Wheat | peroxisome | 25.78 | 26.42 |
| TraesCS5B01G038600.1 | Wheat | cytosol | 25.78 | 26.07 |
| TraesCS3B01G350400.1 | Wheat | peroxisome | 25.33 | 25.85 |
| TraesCS3B01G485500.1 | Wheat | cytosol | 25.11 | 25.74 |
| TraesCS3B01G574700.1 | Wheat | peroxisome | 24.67 | 25.4 |
| TraesCS6B01G017400.1 | Wheat | cytosol | 24.44 | 25.29 |
| TraesCS1B01G005300.1 | Wheat | mitochondrion | 22.22 | 25.13 |
| TraesCS7B01G054000.1 | Wheat | cytosol | 24.0 | 25.12 |
| TraesCS6B01G288300.1 | Wheat | peroxisome | 23.11 | 23.8 |
| TraesCS3B01G485400.1 | Wheat | plasma membrane | 24.44 | 23.55 |
| TraesCS6B01G030200.1 | Wheat | cytosol | 6.0 | 20.45 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G430300.1 | EnsemblPlantsGene:TraesCS6B01G430300 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF13 |
| PFAM:PF02458 | MapMan:50.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:698046357..698047709
Molecular Weight (calculated)
49079.5 Da
IEP (calculated)
6.965
GRAVY (calculated)
-0.128
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVKIESSKI VKPLYEDGEA PAHAEWVPLS VFDKVTYGEH VALIFAFRPP NPPNSEVELG LAKALAVYRE WAGRIGDGPD GRRSVLLKDA GARFVEAAVD
101: APMAVSVPSG PSPDVRRLHP RIDDGPVELV QVQLTRFSCG SLAVGFAGHH QIADGQATAN FLAAWGLATR RLPVSPAPVC DRGTRFSPRE PPVVLFPHQE
201: VEYRTPAPNK EGDAVDKEQE EFVFGAVAQD KVKVHRMHLS KEFVARLKAQ ASSGLPPSRH GYTTFQSVVA HLWRAITVAR RLGAGVTTKV RISVNGRTRM
301: HPPVPRDYFG NVVLWAFPRS DAGELVSRSV GHAAELVYRA VADVDDAYFR SFVDFASSSG AVEAEGLVPT ANSEQAVLCP DLEVDAWLGI NFHGLDFGGG
401: GPFRVMPTYY PMEGSLFLVP STLGDGSMEA YVALFHNHLE EFKRICHKIT
101: APMAVSVPSG PSPDVRRLHP RIDDGPVELV QVQLTRFSCG SLAVGFAGHH QIADGQATAN FLAAWGLATR RLPVSPAPVC DRGTRFSPRE PPVVLFPHQE
201: VEYRTPAPNK EGDAVDKEQE EFVFGAVAQD KVKVHRMHLS KEFVARLKAQ ASSGLPPSRH GYTTFQSVVA HLWRAITVAR RLGAGVTTKV RISVNGRTRM
301: HPPVPRDYFG NVVLWAFPRS DAGELVSRSV GHAAELVYRA VADVDDAYFR SFVDFASSSG AVEAEGLVPT ANSEQAVLCP DLEVDAWLGI NFHGLDFGGG
401: GPFRVMPTYY PMEGSLFLVP STLGDGSMEA YVALFHNHLE EFKRICHKIT
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.